Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01911 and RBAM_011420
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:39
# Commandline: needle
# -asequence dna-align/BSNT_01911___trpS.1.9828.seq
# -bsequence dna-align/RBAM_011420___trpS.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01911___trpS-RBAM_011420___trpS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01911___trpS-RBAM_011420___trpS.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01911___trpS
# 2: RBAM_011420___trpS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1053
# Identity: 803/1053 (76.3%)
# Similarity: 803/1053 (76.3%)
# Gaps: 75/1053 ( 7.1%)
# Score: 3205.0
#
#
#=======================================
BSNT_01911___ 1 ATGAGCCTTTTTTATTATGTTTTAAGAAATGAGGTTGATGTTTTCATGAA 50
|||||
RBAM_011420__ 1 ---------------------------------------------ATGAA 5
BSNT_01911___ 51 ACAAACGATTTTTTCAGGCATTCAGCCAAGCGGCTCAGTGACGCTTGGCA 100
..|||||||||||||||||||||||||.|||||.||.||.||.||.||||
RBAM_011420__ 6 GAAAACGATTTTTTCAGGCATTCAGCCGAGCGGTTCCGTTACCCTCGGCA 55
BSNT_01911___ 101 ACTATATCGGTGCAATGAAGCAGTTTGTCGAACTGCAGCATGATTATAAC 150
||||.|||||.|||||||||||.|||||.||..||||||||||.||.|||
RBAM_011420__ 56 ACTACATCGGCGCAATGAAGCAATTTGTTGATTTGCAGCATGACTACAAC 105
BSNT_01911___ 151 AGCTATTTTTGCATCGTGGACCAGCATGCGATAACTGTTCCTCAAGACCG 200
.||||.||.||.||.||.||.|||||||||||.||.|||||.||.||.||
RBAM_011420__ 106 GGCTACTTCTGTATTGTCGATCAGCATGCGATTACGGTTCCGCAGGATCG 155
BSNT_01911___ 201 GCTTGAGCTTAGAAAGAATATCCGCAATCTCGCGGCGCTTTACTTAGCTG 250
|||||||||..|.|||||.||.||||||||||||||.||||||.|.||.|
RBAM_011420__ 156 GCTTGAGCTGCGGAAGAACATTCGCAATCTCGCGGCTCTTTACGTGGCCG 205
BSNT_01911___ 251 TCGGACTTGATCCAGAAAAAGCAACATTGTTTATTCAGTCAGAGGTCCCC 300
|||||||||||||.||.|||||.||..|.|||||.|||||.|||||.|||
RBAM_011420__ 206 TCGGACTTGATCCCGAGAAAGCGACCCTCTTTATCCAGTCGGAGGTTCCC 255
BSNT_01911___ 301 GCGCATGCGCAGGCCGGATGGATGATGCAGTGTGTCGCTTATATCGGCGA 350
||.|||||.|||||.||.||||||.|.||.||.|||||.|||||||||||
RBAM_011420__ 256 GCTCATGCCCAGGCGGGGTGGATGCTCCAATGCGTCGCATATATCGGCGA 305
BSNT_01911___ 351 GCTTGAGCGGATGACTCAATTTAAGGACAAATCCAAAGGCAATGAAGCTG 400
|||||||||||||||.||||||||.||.||.||.||.|||||.|||||.|
RBAM_011420__ 306 GCTTGAGCGGATGACGCAATTTAAAGATAAGTCAAAGGGCAAAGAAGCCG 355
BSNT_01911___ 401 TCGTCTCCGGCCTGTTAACATATCCGCCGCTGATGGCCGCTGATATTCTG 450
||||.||.||.||||||||.|||||||||||||||||||..||||||.|.
RBAM_011420__ 356 TCGTGTCAGGACTGTTAACCTATCCGCCGCTGATGGCCGGCGATATTTTA 405
BSNT_01911___ 451 CTGTACGGAACGGATCTTGTGCCTGTCGGCGAGGATCAAAAGCAGCACCT 500
||||||||||||||||||||.||.|||||.||.||||||||.|||||.||
RBAM_011420__ 406 CTGTACGGAACGGATCTTGTTCCGGTCGGAGAAGATCAAAAACAGCATCT 455
BSNT_01911___ 501 TGAGCTGACGCGGAATCTTGCAGAACGCTTCAACAAAAAATACAACGACA 550
|||.|||||.||.||.||.||.|||||||||||.|||||||||||.||||
RBAM_011420__ 456 TGAACTGACCCGCAACCTGGCGGAACGCTTCAATAAAAAATACAATGACA 505
BSNT_01911___ 551 TCTTTACGATTCCGGAAGTGAAAATTCCAAAAGTC-GGTGCACGCATCAT 599
||||.||||||||.||.|||||||||||..|| || ||.||.||||||||
RBAM_011420__ 506 TCTTCACGATTCCTGAGGTGAAAATTCCTGAA-TCAGGCGCGCGCATCAT 554
BSNT_01911___ 600 GTCTCTGAATGATCCGCTGAAGAAAATGAGCAAATCTGATCCGAATCAGA 649
|||.|||..|||||||||.||.||||||||||||||.||||||||.||.|
RBAM_011420__ 555 GTCACTGGCTGATCCGCTCAAAAAAATGAGCAAATCAGATCCGAACCAAA 604
BSNT_01911___ 650 AAGCTTATATTACATTGCTGGATGAGCCGAAGCAGCTTGAAAAGAAAATC 699
|.||.||.||.||..||||.|||||||||||||||||.||.|||||||||
RBAM_011420__ 605 AGGCATACATCACGCTGCTTGATGAGCCGAAGCAGCTCGAGAAGAAAATC 654
BSNT_01911___ 700 AAAAGCGCTGTAACTGATTCTGAAGGCATTGTCAAATTTGATAAGGAAAA 749
||.|||||.||.||||||||||||||.|||||.||.|.||||||.|||||
RBAM_011420__ 655 AAGAGCGCCGTGACTGATTCTGAAGGAATTGTAAAGTATGATAAAGAAAA 704
BSNT_01911___ 750 CAAACCGGGCGTTTCAAACCTTCTTACAATTTATTCAATTCTCGGCAATA 799
|||||||||||||||.||.|||.|.||.||.|||||.|||.|.||.||.|
RBAM_011420__ 705 CAAACCGGGCGTTTCTAATCTTTTGACGATCTATTCTATTTTAGGAAACA 754
BSNT_01911___ 800 CGACAATTGAAGAGCTTGAAGCAAAGTACGAAGGAAAAGGCTACGGCGAG 849
|..||||||||||..|.|||||.||.||.|||||.|||||.|||||.||.
RBAM_011420__ 755 CATCAATTGAAGAATTAGAAGCTAAATATGAAGGCAAAGGGTACGGTGAA 804
BSNT_01911___ 850 TTTAAAGGTGATTTGGCAGAAGTCGT----GGTGAACGCATTAAAACCGA 895
||.|||.|.|||||.||.|||||||| || ||||||.|.|||||
RBAM_011420__ 805 TTCAAAAGCGATTTAGCCGAAGTCGTTATCGG----CGCATTGACACCGA 850
BSNT_01911___ 896 TCCAGGACCGCTATTACGAGCTGATAGAATCTGAG------GAATTAGAC 939
||||.||.||||| .|| |||...||| |||| ||..|.|||
RBAM_011420__ 851 TCCAAGAGCGCTA--CCG---TGAATTAAT-TGAGAGCGACGAGCTTGAC 894
BSNT_01911___ 940 CGGATTCTTGATGAAGGCGCGGAACGGGCGAAC----CGGACAGCAAACA 985
||.|||||.||.|||||.||||..||.||.||| |||.|.| ||
RBAM_011420__ 895 CGCATTCTCGACGAAGGAGCGGCGCGCGCAAACAAAACGGCCGG----CA 940
BSNT_01911___ 986 AAATGCTGAAAAAAATGGAGAATGCCATGGGTCTTGGAAGAAAAAGACGC 1035
|||||.||||.||||||||.||.|||||||||||.|||.|.||||||.|.
RBAM_011420__ 941 AAATGGTGAAGAAAATGGAAAACGCCATGGGTCTCGGACGGAAAAGAAGA 990
BSNT_01911___ 1036 TAA 1038
|||
RBAM_011420__ 991 TAA 993
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