Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_01909 and RBAM_011410

See DNA alignment / Visit BSNT_01909 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:39
# Commandline: needle
#    -asequence pep-align/BSNT_01909___yjbA.1.9828.seq
#    -bsequence pep-align/RBAM_011410___yjbA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01909___yjbA-RBAM_011410___yjbA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01909___yjbA-RBAM_011410___yjbA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01909___yjbA
# 2: RBAM_011410___yjbA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 250
# Identity:     237/250 (94.8%)
# Similarity:   244/250 (97.6%)
# Gaps:           0/250 ( 0.0%)
# Score: 1295.0
# 
#
#=======================================

BSNT_01909___      1 MLFLHDVWVNWFEGEENGYNVCHFHEWRKEDTVELLDQVPLLRVPSVLFH     50
                     ||||||||||||||||||||||||||||||||||||||.|||||||||||
RBAM_011410__      1 MLFLHDVWVNWFEGEENGYNVCHFHEWRKEDTVELLDQTPLLRVPSVLFH     50

BSNT_01909___     51 YIENDLSELPKGLLEDVHQKSYIRKNHERTKLEYCFVVTDGIGILAVDTI    100
                     |||||||||||.||:.||||||:|||||||||||||||||||||:|||||
RBAM_011410__     51 YIENDLSELPKELLDQVHQKSYVRKNHERTKLEYCFVVTDGIGIIAVDTI    100

BSNT_01909___    101 GYTIPVRKSRLIPRQEQLVYEMVKDVEPETYEFEPKKLESSKEYHILSLA    150
                     |||||||||||||||||||||||||||||:::|||.:|||||||||||||
RBAM_011410__    101 GYTIPVRKSRLIPRQEQLVYEMVKDVEPESFQFEPAQLESSKEYHILSLA    150

BSNT_01909___    151 PEHVRGLTRKERQIKQLMFMALDQLKGLKNRAEIGYWYTEWNPHMYEQIK    200
                     ||||||||||||||||||||||||||||||||||.|||||||||||||||
RBAM_011410__    151 PEHVRGLTRKERQIKQLMFMALDQLKGLKNRAEIVYWYTEWNPHMYEQIK    200

BSNT_01909___    201 RMSFEEIWDMLYNETIEGWSDKHLAFCENLIKGQPFFEKLWEMENESKVN    250
                     ||||||||||||||||||||||||||||||||||||||||||||.|||||
RBAM_011410__    201 RMSFEEIWDMLYNETIEGWSDKHLAFCENLIKGQPFFEKLWEMEQESKVN    250


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.