Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01909 and RBAM_011410

See Amino acid alignment / Visit BSNT_01909 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:39
# Commandline: needle
#    -asequence dna-align/BSNT_01909___yjbA.1.9828.seq
#    -bsequence dna-align/RBAM_011410___yjbA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01909___yjbA-RBAM_011410___yjbA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01909___yjbA-RBAM_011410___yjbA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01909___yjbA
# 2: RBAM_011410___yjbA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 753
# Identity:     637/753 (84.6%)
# Similarity:   637/753 (84.6%)
# Gaps:           0/753 ( 0.0%)
# Score: 2721.0
# 
#
#=======================================

BSNT_01909___      1 ATGTTATTTCTTCATGATGTGTGGGTCAATTGGTTTGAAGGGGAAGAAAA     50
                     ||||||||||||||||||||.|||||||||||||||||||||||||||||
RBAM_011410__      1 ATGTTATTTCTTCATGATGTATGGGTCAATTGGTTTGAAGGGGAAGAAAA     50

BSNT_01909___     51 TGGCTACAATGTATGCCACTTTCACGAATGGCGCAAGGAAGATACGGTTG    100
                     .|||||||||||||||||.||||||||||||||.||||||||.|||||||
RBAM_011410__     51 CGGCTACAATGTATGCCATTTTCACGAATGGCGGAAGGAAGACACGGTTG    100

BSNT_01909___    101 AGCTTTTGGATCAGGTTCCGCTGCTAAGGGTGCCGTCAGTACTGTTTCAT    150
                     ||||||||||||||...||||||||.||.||||||||.|||.|.||||||
RBAM_011410__    101 AGCTTTTGGATCAGACGCCGCTGCTCAGAGTGCCGTCGGTATTATTTCAT    150

BSNT_01909___    151 TACATAGAAAATGATTTGTCAGAGCTTCCGAAAGGTTTGCTTGAAGACGT    200
                     |||||||||||.||.||.||.|||||||||||||...|||||||..|.||
RBAM_011410__    151 TACATAGAAAACGACTTATCGGAGCTTCCGAAAGAACTGCTTGACCAAGT    200

BSNT_01909___    201 ACATCAGAAATCGTACATTCGGAAAAATCATGAGCGGACAAAGCTTGAGT    250
                     .||.|||||.||.|||.||||.|||||||||||||||||||||||.||||
RBAM_011410__    201 CCACCAGAAGTCATACGTTCGAAAAAATCATGAGCGGACAAAGCTGGAGT    250

BSNT_01909___    251 ATTGTTTTGTCGTAACAGACGGAATCGGCATTTTGGCTGTCGACACGATC    300
                     |||||||||||||.||||||||.||||||||..|.||.||.||.||||||
RBAM_011410__    251 ATTGTTTTGTCGTGACAGACGGGATCGGCATCATTGCCGTGGATACGATC    300

BSNT_01909___    301 GGCTACACGATCCCTGTCAGAAAAAGCCGTTTAATCCCAAGACAGGAGCA    350
                     ||.||.|||||.||.||||||||.|||||..|.||.||.|||||||||||
RBAM_011410__    301 GGGTATACGATTCCGGTCAGAAAGAGCCGCCTGATTCCGAGACAGGAGCA    350

BSNT_01909___    351 GCTCGTTTATGAAATGGTAAAAGATGTAGAGCCTGAAACATATGAATTTG    400
                     |||.|||||||||||||||||.||||||||.||.|||.|.|.|.||||||
RBAM_011410__    351 GCTTGTTTATGAAATGGTAAAGGATGTAGAACCGGAATCGTTTCAATTTG    400

BSNT_01909___    401 AGCCAAAGAAGCTGGAATCCTCCAAGGAATATCACATCTTATCATTAGCA    450
                     ||||...|.|..||||.||.||.||||||||||||||.||.|||||.||.
RBAM_011410__    401 AGCCGGCGCAATTGGAGTCTTCAAAGGAATATCACATTTTGTCATTGGCG    450

BSNT_01909___    451 CCAGAACATGTCAGAGGACTGACTAGAAAAGAACGGCAAATTAAGCAGCT    500
                     ||.||.|||||||||||.|||||.||||||||.|||||.||.||||||||
RBAM_011410__    451 CCGGAGCATGTCAGAGGGCTGACGAGAAAAGAGCGGCAGATCAAGCAGCT    500

BSNT_01909___    501 GATGTTTATGGCGCTTGACCAATTAAAAGGGCTGAAAAATCGGGCTGAAA    550
                     |||||||||||||||.|||||..|.||||||||||||||.||.||.||||
RBAM_011410__    501 GATGTTTATGGCGCTCGACCAGCTGAAAGGGCTGAAAAACCGTGCGGAAA    550

BSNT_01909___    551 TCGGCTACTGGTACACAGAGTGGAATCCGCATATGTATGAACAAATCAAA    600
                     |.|..||.||||||||.||.|||||||||||||||||.||.||.||||||
RBAM_011410__    551 TTGTGTATTGGTACACGGAATGGAATCCGCATATGTACGAGCAGATCAAA    600

BSNT_01909___    601 AGGATGAGCTTTGAAGAGATTTGGGACATGCTGTATAACGAAACAATTGA    650
                     .|||||||||||||||||||||||||||||||.||.||.|||||||||||
RBAM_011410__    601 CGGATGAGCTTTGAAGAGATTTGGGACATGCTTTACAATGAAACAATTGA    650

BSNT_01909___    651 AGGCTGGTCGGACAAGCACCTAGCTTTTTGCGAAAACCTAATAAAAGGAC    700
                     |||||||||.||.||.||.||.||.||.||.|||||..|.||.|||||.|
RBAM_011410__    651 AGGCTGGTCAGATAAACATCTTGCGTTCTGTGAAAATTTGATTAAAGGGC    700

BSNT_01909___    701 AGCCTTTTTTCGAAAAGCTTTGGGAAATGGAAAACGAATCAAAGGTCAAC    750
                     ||||.||||||||||||||||||||||||||..|.||||||||.||.|||
RBAM_011410__    701 AGCCGTTTTTCGAAAAGCTTTGGGAAATGGAGCAGGAATCAAAAGTGAAC    750

BSNT_01909___    751 TGA    753
                     |.|
RBAM_011410__    751 TAA    753


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