Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01907 and RBAM_011400

See DNA alignment / Visit BSNT_01907 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:39
# Commandline: needle
#    -asequence pep-align/BSNT_01907___appC.1.9828.seq
#    -bsequence pep-align/RBAM_011400___appC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01907___appC-RBAM_011400___appC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01907___appC-RBAM_011400___appC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01907___appC
# 2: RBAM_011400___appC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 304
# Identity:     250/304 (82.2%)
# Similarity:   279/304 (91.8%)
# Gaps:           1/304 ( 0.3%)
# Score: 1287.0
# 
#
#=======================================

BSNT_01907___      1 MSELQT-TPSPEIRLKENISKKPETMTKIFWGKFSKNKLAILGAVILFII     49
                     |.:..| ||..|::|||||..|||||||||:.||.:||||::|||||.||
RBAM_011400__      1 MLQPNTGTPPSEVKLKENIQSKPETMTKIFFEKFFQNKLAVIGAVILTII     50

BSNT_01907___     50 IMSAVFAPLIAPYPQEQQSLLDKYKAPGLEHLMGTDKFGRDIFSRILYGA     99
                     |:||:||.:||||..|.|||:::.|.|.|:|||||||||||||:|:||||
RBAM_011400__     51 ILSALFASVIAPYSPESQSLINRLKPPSLKHLMGTDKFGRDIFTRVLYGA    100

BSNT_01907___    100 RVSLLVGFASVVGSILIGTVLGALAGYFRGIVDAVIMRVVDIVLSIPDIF    149
                     |||||||||||:|:|.||||:||:||||:||||||:||.|||||||||||
RBAM_011400__    101 RVSLLVGFASVIGAITIGTVVGAVAGYFKGIVDAVLMRTVDIVLSIPDIF    150

BSNT_01907___    150 LLITLVTIFKPGVDKLILIFCLTGWTTTARLVRGEFLSLRSREYVLAAKT    199
                     |||||||||:||:|||||||.||||||||||||||||||||||:||||||
RBAM_011400__    151 LLITLVTIFQPGMDKLILIFSLTGWTTTARLVRGEFLSLRSREFVLAAKT    200

BSNT_01907___    200 IGTKTHKIIFSHILPNALGPIIVSATLKVGSVILAESALSYLGFGIQPPI    249
                     ||||.|.|||||||||||||||||||||||:||||||.||||||||||||
RBAM_011400__    201 IGTKNHHIIFSHILPNALGPIIVSATLKVGTVILAESTLSYLGFGIQPPI    250

BSNT_01907___    250 ASWGNMLQDAQNFTVMIQAWWYPLFPGLFILMTVLCFNFVGDGLRDALDP    299
                     ||||||||||||||:|||||||||||||.||:||||||||||||||||||
RBAM_011400__    251 ASWGNMLQDAQNFTLMIQAWWYPLFPGLLILLTVLCFNFVGDGLRDALDP    300

BSNT_01907___    300 KNIK    303
                     ||:|
RBAM_011400__    301 KNVK    304


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