Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01900 and RBAM_011350

See DNA alignment / Visit BSNT_01900 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:38
# Commandline: needle
#    -asequence pep-align/BSNT_01900___yjaZ.1.9828.seq
#    -bsequence pep-align/RBAM_011350___yjaZ.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01900___yjaZ-RBAM_011350___yjaZ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01900___yjaZ-RBAM_011350___yjaZ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01900___yjaZ
# 2: RBAM_011350___yjaZ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 261
# Identity:     180/261 (69.0%)
# Similarity:   220/261 (84.3%)
# Gaps:           0/261 ( 0.0%)
# Score: 979.0
# 
#
#=======================================

BSNT_01900___      1 MSVEQTYSWLRKAGSIDDLAHYIIPLFSGAEKKNWKGILGHLQHHGMFKN     50
                     |||:|||.|:.||.|::|||.:::||||||:||.||.|||.||:||||::
RBAM_011350__      1 MSVKQTYQWMEKAASVNDLAPHLLPLFSGADKKEWKPILGMLQNHGMFRH     50

BSNT_01900___     51 IKEGIQTVSKLKEKGFYGHIQKEEQYLKNKWQGPDVPIVTLPVDERNRRI    100
                     :|:|::|..:|||||.|.||||||.|||.||.|||||||.||||||||:|
RBAM_011350__     51 LKDGVRTSKRLKEKGCYSHIQKEEAYLKEKWNGPDVPIVVLPVDERNRKI    100

BSNT_01900___    101 RLEFGSKSGLAFQDKMFLFLSSDLDFGSVSALMTHEYHHVCRLGHLTKEE    150
                     |.||||||||||:||||||||||....:|||||||||:|||||.|:||:|
RBAM_011350__    101 RQEFGSKSGLAFRDKMFLFLSSDSSNSAVSALMTHEYNHVCRLEHVTKDE    150

BSNT_01900___    151 KDVTLLDTIIMEGLAEYAVYERFGRSQTAEWTTWYTPEQLQALYEKKIAP    200
                     ||.|.||||:||||||||||||||.|.|||||::||||||..|:||::.|
RBAM_011350__    151 KDETFLDTIMMEGLAEYAVYERFGSSLTAEWTSYYTPEQLDFLFEKRVKP    200

BSNT_01900___    201 HRDIKRDNRLFPQLLFGKGYQPKMLGYAVGFNIVKKYLTASKASAADGLS    250
                     :..:.||:|:|.|||:||||.|.||||||||||||||||..:.:..:.|:
RBAM_011350__    201 NLRLTRDSRMFSQLLYGKGYFPSMLGYAVGFNIVKKYLTDHQKTVKEALA    250

BSNT_01900___    251 IPAETFLDAML    261
                     ||::|||:|.|
RBAM_011350__    251 IPSKTFLEATL    261


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