Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01894 and RBAM_011300

See DNA alignment / Visit BSNT_01894 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:37
# Commandline: needle
#    -asequence pep-align/BSNT_01894___med.1.9828.seq
#    -bsequence pep-align/RBAM_011300___med.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01894___med-RBAM_011300___med.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01894___med-RBAM_011300___med.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01894___med
# 2: RBAM_011300___med
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 317
# Identity:     249/317 (78.5%)
# Similarity:   286/317 (90.2%)
# Gaps:           0/317 ( 0.0%)
# Score: 1370.0
# 
#
#=======================================

BSNT_01894___      1 MITRLVMIFSVLLLLSGCGKTPFKGKIEKVGMLFPDTINDLVWGTKGYKG     50
                     ||||||||||||||||||.:||||||||||||||||||:|||||||||||
RBAM_011300__      1 MITRLVMIFSVLLLLSGCAQTPFKGKIEKVGMLFPDTISDLVWGTKGYKG     50

BSNT_01894___     51 LLNIQSKYNVDVYYKEGVKTEEDIINAIEDFHKRGVNLLYGHGSEYAEVF    100
                     ||.|||::||||||||.::::|||:.||:||||:|||||||||:||.|:|
RBAM_011300__     51 LLAIQSEFNVDVYYKENIRSDEDILKAIDDFHKKGVNLLYGHGNEYEEIF    100

BSNT_01894___    101 NLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQ    150
                     |::.:||||||||::|..||:|||||||..|||||||||||||||||||:
RBAM_011300__    101 NMISKDYPDMEFVVANGTAKSDNVTSVHLMGEAMGFFGGMTAAHMSKTNE    150

BSNT_01894___    151 VGVIASFTWQPEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKM    200
                     |||||||.|||||||||||||||.|||.|||::|||||:...|:.||:|:
RBAM_011300__    151 VGVIASFLWQPEVDGFIKGAKYEKPDITVNTEFTDHWDNGNEALHLYEKL    200

BSNT_01894___    201 KNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDLGENTVLTSTV    250
                     |.||.|||||||||||||||||||||||||||||.:||:||:||||||||
RBAM_011300__    201 KAEGTDVVYPAGDGYNVPVIQQIKKDGLYAIGYVAEQSNLGKNTVLTSTV    250

BSNT_01894___    251 QNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDKDFQQRI    300
                     |||||||.:||||:|||||:.|||.:|...||||||||||||||.||.:|
RBAM_011300__    251 QNVDKAYTLIAEQYNKGTLKSGDHNFDFREGVVEMGTFSPLVDKAFQDKI    300

BSNT_01894___    301 AKLIKTYNKTGELPKNE    317
                     :.|:||||:|.|||.||
RBAM_011300__    301 SDLVKTYNRTNELPSNE    317


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