Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01892 and RBAM_011290
See
DNA alignment /
Visit
BSNT_01892 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:37
# Commandline: needle
# -asequence pep-align/BSNT_01892.1.9828.seq
# -bsequence pep-align/RBAM_011290___yjaV.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01892-RBAM_011290___yjaV.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01892-RBAM_011290___yjaV.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01892
# 2: RBAM_011290___yjaV
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 189
# Identity: 99/189 (52.4%)
# Similarity: 132/189 (69.8%)
# Gaps: 5/189 ( 2.6%)
# Score: 514.0
#
#
#=======================================
BSNT_01892 1 MESTLIVGADEFFGLSLCERMMDEGIHVDVVLAETEDKMRQMYLEERLMW 50
|::.||:|||||.|||||||:||||:||||:|||.|||.||:||||||||
RBAM_011290__ 1 MKTALIIGADEFLGLSLCERLMDEGVHVDVILAEPEDKTRQLYLEERLMW 50
BSNT_01892 51 LGRNELFRQLEHIGDQNYDTICIQFGS-FLPLDQCDSPYILVYEEDRKEW 99
|.||.||:.::.||::.||.||:|:|| .||.::.:..|.:||.||..:|
RBAM_011290__ 51 LARNGLFQIIDEIGEKEYDRICVQYGSGCLPEERAEPLYWIVYSEDHGDW 100
BSNT_01892 100 EKREKTGSEKTVILPKMYGPWKEETEEDG---YYTNDVADELLRFLLEPS 146
||..:..:.|.:|||.:|||| .|.:||| .:..|....|:..|....
RBAM_011290__ 101 EKNGQRDTAKAIILPPLYGPW-TEAKEDGESRIFLEDAVCGLMNQLEAYG 149
BSNT_01892 147 RHSKDQLFELQVTEKTSKEEAKTKIIEWKRQFSSIFDKY 185
...::|:..|::.|||.|.||:.||.|||||||||||.:
RBAM_011290__ 150 TEDENQIITLEIKEKTQKTEAEEKIKEWKRQFSSIFDIF 188
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.