Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01890 and RBAM_011280

See DNA alignment / Visit BSNT_01890 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:37
# Commandline: needle
#    -asequence pep-align/BSNT_01890___yjaU.1.9828.seq
#    -bsequence pep-align/RBAM_011280___yjaU.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01890___yjaU-RBAM_011280___yjaU.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01890___yjaU-RBAM_011280___yjaU.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01890___yjaU
# 2: RBAM_011280___yjaU
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 244
# Identity:     172/244 (70.5%)
# Similarity:   211/244 (86.5%)
# Gaps:           0/244 ( 0.0%)
# Score: 968.0
# 
#
#=======================================

BSNT_01890___      1 MGITERYFQLGTEHNVIHLPYRPNGFGIFILGDRTHFVGHDSSFWQQHYG     50
                     ||||||:||.|:|.||||||||||||.||||||:||||..|||||.:|.|
RBAM_011280__      1 MGITERFFQFGSELNVIHLPYRPNGFCIFILGDKTHFVSRDSSFWLEHEG     50

BSNT_01890___     51 RNQLLSMLRNEGYTLFNSNLFGRHWGAEKAVTYAKQLIHSVLKQEILNPK    100
                     |||||:.:.:.|||:|||||:|||||:||||.||:||||.|||||.||||
RBAM_011280__     51 RNQLLNTMLDRGYTIFNSNLYGRHWGSEKAVLYARQLIHYVLKQETLNPK    100

BSNT_01890___    101 IHILAEGMGALVADELLRFSPDHIRSAAMLNPCLDLQAHYESEKENKFFY    150
                     ||:||||||||:||:||:.|.:||||||||:||||||||:||||||||||
RBAM_011280__    101 IHLLAEGMGALIADQLLQSSAEHIRSAAMLDPCLDLQAHFESEKENKFFY    150

BSNT_01890___    151 KQFLKEVSKSYGISEKEAEALRYKTIQSYPSGVPVHIWQRMTGAPYPYSV    200
                     ||||:|.::|:|:|||||.:|.|:||....:.||||||||.|||||||::
RBAM_011280__    151 KQFLRETAQSFGVSEKEASSLSYQTITGCRTRVPVHIWQRTTGAPYPYTL    200

BSNT_01890___    201 HAEVFKEKQQKQGSPVDMTFHLFEHPSRIYASICKFFHSHEKEL    244
                     ||..:||.::|.||..|:|:||.|:|:|:|.:||:||.||||:|
RBAM_011280__    201 HANAYKEAREKTGSKTDITYHLLENPARMYRAICRFFRSHEKDL    244


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