Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01889 and RBAM_011270

See DNA alignment / Visit BSNT_01889 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:37
# Commandline: needle
#    -asequence pep-align/BSNT_01889___yjzD.1.9828.seq
#    -bsequence pep-align/RBAM_011270___yjzD.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01889___yjzD-RBAM_011270___yjzD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01889___yjzD-RBAM_011270___yjzD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01889___yjzD
# 2: RBAM_011270___yjzD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 61
# Identity:      47/61 (77.0%)
# Similarity:    54/61 (88.5%)
# Gaps:           0/61 ( 0.0%)
# Score: 245.0
# 
#
#=======================================

BSNT_01889___      1 MRYIIAFIWTFLLSHMACYLVASMNSVTYNFKTSSVIAVVLYVLIMVLAE     50
                     ||:||.|||||||:||||||||||||..||||.|||||||:.||:.||||
RBAM_011270__      1 MRFIIGFIWTFLLTHMACYLVASMNSAAYNFKQSSVIAVVIAVLVFVLAE     50

BSNT_01889___     51 IMPMNKNASQH     61
                     |||:.::||||
RBAM_011270__     51 IMPVKQDASQH     61


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