Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01889 and RBAM_011270
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:37
# Commandline: needle
# -asequence dna-align/BSNT_01889___yjzD.1.9828.seq
# -bsequence dna-align/RBAM_011270___yjzD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01889___yjzD-RBAM_011270___yjzD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01889___yjzD-RBAM_011270___yjzD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01889___yjzD
# 2: RBAM_011270___yjzD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 190
# Identity: 143/190 (75.3%)
# Similarity: 143/190 (75.3%)
# Gaps: 8/190 ( 4.2%)
# Score: 536.0
#
#
#=======================================
BSNT_01889___ 1 GTGCGATATATTATTGCCTTTATTTGGACGTTCCTTTTATCACATATGGC 50
|||||.|.||||||.|..|||||||||||||||||||||.||||||||||
RBAM_011270__ 1 GTGCGGTTTATTATCGGTTTTATTTGGACGTTCCTTTTAACACATATGGC 50
BSNT_01889___ 51 ATGCTACTTGGTTGCAAGCATGAACAGCGTTACGTATAATTTCAAAACAT 100
.||.||.|||||.||...|||||||||||...||||.||||||||...||
RBAM_011270__ 51 CTGTTATTTGGTCGCCTCCATGAACAGCGCGGCGTACAATTTCAAGCAAT 100
BSNT_01889___ 101 CATCTGTCATTGCTGTTGTACTGTAT----GTCTTAATCATGGTTTTAGC 146
||||.||.|||||.||.|| ||| ||..||.||.|.|||.|.||
RBAM_011270__ 101 CATCCGTTATTGCCGTGGT----TATTGCGGTGCTAGTCTTTGTTCTTGC 146
BSNT_01889___ 147 AGAAATCATGCCTATGAACAAAAATGCAAGCCAGCATTAA 186
.||.|||||||||.|.||..|..|||||||||||||||||
RBAM_011270__ 147 GGAGATCATGCCTGTCAAACAGGATGCAAGCCAGCATTAA 186
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