Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01885 and RBAM_011250

See DNA alignment / Visit BSNT_01885 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:37
# Commandline: needle
#    -asequence pep-align/BSNT_01885___argF.1.9828.seq
#    -bsequence pep-align/RBAM_011250___argF.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01885___argF-RBAM_011250___argF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01885___argF-RBAM_011250___argF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01885___argF
# 2: RBAM_011250___argF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 323
# Identity:     265/323 (82.0%)
# Similarity:   285/323 (88.2%)
# Gaps:           4/323 ( 1.2%)
# Score: 1329.5
# 
#
#=======================================

BSNT_01885___      1 MHTV----TQTSLYGKDLLTLKDLSEEDINALLAEAGELKQNKIQPIFHG     46
                     |||:    |.|.|||||.|:|||:|..||||||.||..|||:.|||||.|
RBAM_011250__      1 MHTIKAEHTLTHLYGKDFLSLKDVSPSDINALLTEASLLKQHPIQPIFQG     50

BSNT_01885___     47 KTLAMIFEKSSTRTRVSFEAGMAQLGGNALFLSQKDLQLGRGETVADTAK     96
                     |||||||||||||||||||||||||||..||||..|||||||||||||||
RBAM_011250__     51 KTLAMIFEKSSTRTRVSFEAGMAQLGGTGLFLSSSDLQLGRGETVADTAK    100

BSNT_01885___     97 VLSGYVDAIMIRTFEHEKVEELAKEADIPVINGLTDKYHPCQALADLLTI    146
                     ||||:||||||||||||||||||:.|||||||||||:|||||||||||||
RBAM_011250__    101 VLSGFVDAIMIRTFEHEKVEELAEHADIPVINGLTDRYHPCQALADLLTI    150

BSNT_01885___    147 KEIKGKLKGVKVSYIGDGNNVAHSLMIGCAKMGCDISIASPKGYEVLDEA    196
                     :||||||||||.:|||||||||||||||||||||||:|||||||||.:||
RBAM_011250__    151 QEIKGKLKGVKAAYIGDGNNVAHSLMIGCAKMGCDIAIASPKGYEVEEEA    200

BSNT_01885___    197 AEAAKTYALQSGSSITLTDDPIEAVKDADVIYSDVFTSMGQEAEEQERLA    246
                     ..|||..|..||:.||||::|.|||:||||||||||||||||.|.|:||.
RBAM_011250__    201 VNAAKEAAAVSGAKITLTENPQEAVRDADVIYSDVFTSMGQEEETQQRLN    250

BSNT_01885___    247 VFAPYQVNAALVSHAKPDYTFLHCLPAHREEEVTAEIIDGPNSAVFQQAE    296
                     |||||||||:|||.||||||||||||||||||||:|||||||||||||||
RBAM_011250__    251 VFAPYQVNASLVSLAKPDYTFLHCLPAHREEEVTSEIIDGPNSAVFQQAE    300

BSNT_01885___    297 NRLHVQKALLKAILYKGESSKNC    319
                     ||||.|||||||:|||.:..||.
RBAM_011250__    301 NRLHAQKALLKALLYKQDEQKNR    323


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