Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01870 and RBAM_011140

See DNA alignment / Visit BSNT_01870 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:35
# Commandline: needle
#    -asequence pep-align/BSNT_01870___yitV.1.9828.seq
#    -bsequence pep-align/RBAM_011140___yitV.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01870___yitV-RBAM_011140___yitV.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01870___yitV-RBAM_011140___yitV.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01870___yitV
# 2: RBAM_011140___yitV
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 255
# Identity:     189/255 (74.1%)
# Similarity:   215/255 (84.3%)
# Gaps:           0/255 ( 0.0%)
# Score: 1008.0
# 
#
#=======================================

BSNT_01870___      1 MIQIENQTVSGIPFLHIVKEENRHRAVPLVIFIHGFTSAKEHNLHIAYLL     50
                     ||.|::|||||||||||||||||.|..|||.||||||||||||||.||||
RBAM_011140__      1 MILIDHQTVSGIPFLHIVKEENRDRPAPLVFFIHGFTSAKEHNLHFAYLL     50

BSNT_01870___     51 AEKGFRAVLPEALHHGERGEEMAVEELAGHFWDIVLNEIEEIGVLKNLFE    100
                     |||||||||||||:||||.|:::.||||.||||||||||||:.|||..||
RBAM_011140__     51 AEKGFRAVLPEALYHGERAEQLSAEELAVHFWDIVLNEIEELDVLKKDFE    100

BSNT_01870___    101 KEGLIDGGRIGLAGTSMGGITTLGALTAYDWIKAGVSLMGSPNYVELFQQ    150
                     ...||:.|||||||||||||||.||:.||||:||||||||||||...|||
RBAM_011140__    101 ARSLIEDGRIGLAGTSMGGITTFGAMAAYDWVKAGVSLMGSPNYTAFFQQ    150

BSNT_01870___    151 QIDHIQSQGIEIDVPEEKVQQLMKRLELRDLSLQPEKLQQRPLLFWHGAK    200
                     ||||||.|.|:|||.:|:|.:|..||:..||||:||||:.||||||||.:
RBAM_011140__    151 QIDHIQKQDIDIDVTKEQVDELFARLKPFDLSLEPEKLRSRPLLFWHGVQ    200

BSNT_01870___    201 DKVVPYAPTRKFYDTIKSHYSEQPERLQFIGDENADHKVPRAAVLKTIEW    250
                     ||||||||||.||:|||.|||.:|:.|||:.||.|||||||.|||:|:.|
RBAM_011140__    201 DKVVPYAPTRGFYETIKPHYSSRPDHLQFLKDERADHKVPRYAVLETVAW    250

BSNT_01870___    251 FETYL    255
                     |:.:|
RBAM_011140__    251 FDKHL    255


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