Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01866 and RBAM_011090

See DNA alignment / Visit BSNT_01866 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:35
# Commandline: needle
#    -asequence pep-align/BSNT_01866___yitT.1.9828.seq
#    -bsequence pep-align/RBAM_011090___yitT.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01866___yitT-RBAM_011090___yitT.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01866___yitT-RBAM_011090___yitT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01866___yitT
# 2: RBAM_011090___yitT
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 280
# Identity:     258/280 (92.1%)
# Similarity:   271/280 (96.8%)
# Gaps:           0/280 ( 0.0%)
# Score: 1313.0
# 
#
#=======================================

BSNT_01866___      1 MVLDQTKKLLIVIIGALLNAAGLNLFLIPADVYASGFTGVAQLLSSVVDQ     50
                     |||:|.|||.||:|||.|.|||||||||||:|||||||||||||||||||
RBAM_011090__      1 MVLEQAKKLAIVVIGAFLYAAGLNLFLIPANVYASGFTGVAQLLSSVVDQ     50

BSNT_01866___     51 YAPFYISTGTLLFLLNIPVGILGWLKVGKSFTVYSILSVALTTLFMGILP    100
                     |||||||||.|:||||||:|:|||||||:|||||||||||||::||||||
RBAM_011090__     51 YAPFYISTGVLMFLLNIPIGVLGWLKVGRSFTVYSILSVALTSVFMGILP    100

BSNT_01866___    101 ETSLSHDILLNAVFGGVISAVGIGLTLKYGASTGGLDIVAMVLAKWKDKP    150
                     |..||||||||.||||||||:|||||||:||||||||||:||||||||||
RBAM_011090__    101 EMRLSHDILLNTVFGGVISAIGIGLTLKFGASTGGLDIVSMVLAKWKDKP    150

BSNT_01866___    151 VGTYFFILNGIIILTAGLLQGWEKALYTLVTLYVTTRVIDAIHTRHMKLT    200
                     ||||||||||||||||||||||||||||||.|||||||||||||||||||
RBAM_011090__    151 VGTYFFILNGIIILTAGLLQGWEKALYTLVALYVTTRVIDAIHTRHMKLT    200

BSNT_01866___    201 AMIVTKKADEIKEAIYGKMVRGITTVPAKGAFTNEQKEMMIIVITRYELY    250
                     |||||||||||||||||||||||||||||||:||||||||||||||||||
RBAM_011090__    201 AMIVTKKADEIKEAIYGKMVRGITTVPAKGAYTNEQKEMMIIVITRYELY    250

BSNT_01866___    251 DLEKIVKEVDPKAFTNIVQTTGIFGFFRKD    280
                     ||||||||||||||||||||||||||||||
RBAM_011090__    251 DLEKIVKEVDPKAFTNIVQTTGIFGFFRKD    280


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