Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01866 and RBAM_011090

See Amino acid alignment / Visit BSNT_01866 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:35
# Commandline: needle
#    -asequence dna-align/BSNT_01866___yitT.1.9828.seq
#    -bsequence dna-align/RBAM_011090___yitT.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01866___yitT-RBAM_011090___yitT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01866___yitT-RBAM_011090___yitT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01866___yitT
# 2: RBAM_011090___yitT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 845
# Identity:     700/845 (82.8%)
# Similarity:   700/845 (82.8%)
# Gaps:           4/845 ( 0.5%)
# Score: 2915.0
# 
#
#=======================================

BSNT_01866___      1 ATGGTACTAGATCAAACAAAAAAATTACTCATCGTCATCATCGGCGCTTT     50
                     |||||||||||.|||.|||||||||||...||||||.||||||||||.||
RBAM_011090__      1 ATGGTACTAGAACAAGCAAAAAAATTAGCAATCGTCGTCATCGGCGCGTT     50

BSNT_01866___     51 ACTCAATGCTGCCGGGCTGAACTTATTTTTGATACCTGCAGATGTATATG    100
                     .||..||||.||.||.|||||.|||||..|||||||.||..|||||||||
RBAM_011090__     51 TCTGTATGCGGCGGGACTGAATTTATTCCTGATACCGGCGAATGTATATG    100

BSNT_01866___    101 CCAGCGGATTTACAGGTGTTGCCCAGCTTTTATCAAGCGTCGTTGATCAA    150
                     |||||||.|||||.|||||.||||||||..|.||||||||||||||||||
RBAM_011090__    101 CCAGCGGTTTTACCGGTGTCGCCCAGCTGCTGTCAAGCGTCGTTGATCAA    150

BSNT_01866___    151 TATGCCCCCTTTTACATATCGACGGGAACGCTCTTGTTCCTCTTAAACAT    200
                     ||.|||||||||||.||.|||||.|||...|||.||||||||||||||||
RBAM_011090__    151 TACGCCCCCTTTTATATTTCGACAGGAGTTCTCATGTTCCTCTTAAACAT    200

BSNT_01866___    201 TCCGGTCGGTATTTTAGGATGGCTGAAGGTCGGCAAATCGTTTACAGTGT    250
                     |||..|||||.|.|||||.||||||||.|||||||.|||.||.||.||.|
RBAM_011090__    201 TCCCATCGGTGTGTTAGGGTGGCTGAAAGTCGGCAGATCATTCACTGTAT    250

BSNT_01866___    251 ACAGCATTTTAAGTGTCGCACTCACTACTCTGTTTATGGGGATCCTGCCG    300
                     |||||||||||||.||.||.||.||..|..|.||||||||.||.||.|||
RBAM_011090__    251 ACAGCATTTTAAGCGTAGCGCTGACGTCCGTCTTTATGGGAATTCTTCCG    300

BSNT_01866___    301 GAAACAAGCCTGTCACATGACATTTTGCTGAACGCGGTGTTCGGCGGCGT    350
                     ||||..||.|||||.||.||.|||.|.|||||..|.||.|||||.||.||
RBAM_011090__    301 GAAATGAGACTGTCGCACGATATTCTTCTGAATACCGTATTCGGAGGAGT    350

BSNT_01866___    351 CATTTCCGCAGTCGGTATCGGCTTAACATTAAAATACGGAGCTTCGACAG    400
                     |||.||.||..||||.|||||.|||||..|.||||.|||.||||||||||
RBAM_011090__    351 CATCTCAGCTATCGGCATCGGTTTAACGCTGAAATTCGGCGCTTCGACAG    400

BSNT_01866___    401 GCGGGCTTGATATCGTCGCCATGGTGCTTGCAAAGTGGAAGGATAAACCC    450
                     ||||.|||||||||||..|.||||||||.||.||.|||||||||||.||.
RBAM_011090__    401 GCGGTCTTGATATCGTGTCGATGGTGCTGGCCAAATGGAAGGATAAGCCG    450

BSNT_01866___    451 GTCGGCACGTATTTCTTCATTCTGAACGGGATTATCATCTTGACGGCAGG    500
                     ||||||||.||||||||||||.||||||||||||||||.|||||||||||
RBAM_011090__    451 GTCGGCACATATTTCTTCATTTTGAACGGGATTATCATTTTGACGGCAGG    500

BSNT_01866___    501 ATTATTGCAAGGTTGGGAGAAAGCATTATATACCCTGGTTACACTATATG    550
                     ||||||||||||.|||||||||||||||||||||||.||..|.||.||||
RBAM_011090__    501 ATTATTGCAAGGATGGGAGAAAGCATTATATACCCTTGTCGCTCTGTATG    550

BSNT_01866___    551 TGACAACGAGGGTGATCGACGCAATTCACACTCGCCACATGAAGCTTACG    600
                     |.|||||.||||||||.|||||.||||||||.|||||||||||.||.||.
RBAM_011090__    551 TCACAACAAGGGTGATTGACGCCATTCACACCCGCCACATGAAACTGACC    600

BSNT_01866___    601 GCAATGATTGTGACGAAAAAAGCGGACGAAATCAAGGAAGCCATTTACGG    650
                     ||.|||||.||.||.||||||||.||.||||||||.|||||.||||||||
RBAM_011090__    601 GCCATGATCGTTACAAAAAAAGCCGATGAAATCAAAGAAGCGATTTACGG    650

BSNT_01866___    651 AAAAATGGTGCGCGGCATCACAACTGTTCCGGCAAAAGGAGCTTTTACGA    700
                     .||||||||.||||||||.||.||.||.|||||||||||.||||..||.|
RBAM_011090__    651 GAAAATGGTCCGCGGCATTACGACGGTGCCGGCAAAAGGCGCTTACACAA    700

BSNT_01866___    701 ACGAACAGAAAGAAATGATGATTATCGTCATCACGAGGTATGAACTGTAC    750
                     ||||||||||||||||||||||.||||||||||||.||||.|||.||||.
RBAM_011090__    701 ACGAACAGAAAGAAATGATGATCATCGTCATCACGCGGTACGAATTGTAT    750

BSNT_01866___    751 GA--TTTAGAAAAGATCGTCAAAGAAGTTGATCCGAAAGCATTTACGAAC    798
                     ||  ||.|||||  |||||.||||||||.||.||||||||.||.||.|||
RBAM_011090__    751 GACCTTGAGAAA--ATCGTGAAAGAAGTCGACCCGAAAGCCTTCACAAAC    798

BSNT_01866___    799 ATCGTTCAAACGACAGGGATTTTTGGTTTCTTTAGAAAAGACTGA    843
                     |||||.||||||||.|||||.|||||||||||.||||||||||||
RBAM_011090__    799 ATCGTGCAAACGACGGGGATCTTTGGTTTCTTCAGAAAAGACTGA    843


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