Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01862 and RBAM_011040

See DNA alignment / Visit BSNT_01862 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:35
# Commandline: needle
#    -asequence pep-align/BSNT_01862___yitL.1.9828.seq
#    -bsequence pep-align/RBAM_011040___yitL.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01862___yitL-RBAM_011040___yitL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01862___yitL-RBAM_011040___yitL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01862___yitL
# 2: RBAM_011040___yitL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 282
# Identity:     247/282 (87.6%)
# Similarity:   268/282 (95.0%)
# Gaps:           0/282 ( 0.0%)
# Score: 1310.0
# 
#
#=======================================

BSNT_01862___      1 MRPGQQLTLSIDHQTDFGYFLTDGEDTILLHNSEMTEDIGDRDEVEVFIY     50
                     |||||||||||||||||||||||||||:||||||:||||.|||||:||||
RBAM_011040__      1 MRPGQQLTLSIDHQTDFGYFLTDGEDTVLLHNSEITEDIEDRDEVDVFIY     50

BSNT_01862___     51 VDQQERLAATMKIPVISADEYGWVEVVDKVEDMGVFVDVGLSKDALVATE    100
                     ||.|||||||||.|:||..:||||||.|.|||||||||||||||||||||
RBAM_011040__     51 VDHQERLAATMKKPLISFYDYGWVEVTDAVEDMGVFVDVGLSKDALVATE    100

BSNT_01862___    101 HLPPYEDVWPQKGDKLYCMLKVTNRGRMFAKPAPEDIISELFTDASEDLM    150
                     |||||:.|||||||:||||||||:|||||||||||||||||||||.||:|
RBAM_011040__    101 HLPPYKSVWPQKGDRLYCMLKVTSRGRMFAKPAPEDIISELFTDAEEDVM    150

BSNT_01862___    151 NKELTGTVYRLIASGSFVITDDGIRCFIHPSERKEEPRLGSKVTGRVIQV    200
                     ||:||||||||||||||:|||:|||.|||||||||||||||:||||||:|
RBAM_011040__    151 NKDLTGTVYRLIASGSFLITDEGIRAFIHPSERKEEPRLGSRVTGRVIEV    200

BSNT_01862___    201 KEDGSVNLSLLPRKQDAMSVDAECILTYMRMRNGAMPYSDKSQPDDIRER    250
                     |||||||:|||||||||:|||||.||||:|.|||||||.|||.|||||||
RBAM_011040__    201 KEDGSVNMSLLPRKQDALSVDAEEILTYLRSRNGAMPYGDKSHPDDIRER    250

BSNT_01862___    251 FNMSKAAFKRALGHLMKNGKVYQENGWTYEKK    282
                     |::|||||||||||||||||||||:||||||:
RBAM_011040__    251 FHLSKAAFKRALGHLMKNGKVYQEDGWTYEKQ    282


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