Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01861 and RBAM_011030

See DNA alignment / Visit BSNT_01861 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:35
# Commandline: needle
#    -asequence pep-align/BSNT_01861___yitK.1.9828.seq
#    -bsequence pep-align/RBAM_011030___yitk.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01861___yitK-RBAM_011030___yitk.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01861___yitK-RBAM_011030___yitk.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01861___yitK
# 2: RBAM_011030___yitk
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 163
# Identity:     146/163 (89.6%)
# Similarity:   157/163 (96.3%)
# Gaps:           0/163 ( 0.0%)
# Score: 742.0
# 
#
#=======================================

BSNT_01861___      1 MAKESSFDIVSKVELPEVQNAIQIALKEISTRYDFKGSKSDISLDKEELV     50
                     ||||||||||||||.||||||||:.||||.|||||||||||::|:|||||
RBAM_011030__      1 MAKESSFDIVSKVEFPEVQNAIQMTLKEIGTRYDFKGSKSDVTLEKEELV     50

BSNT_01861___     51 LVSDDEFKLSQLKDVLVSKLIKRNVPTKNIEYGKVENASGGTVRQRAKLV    100
                     |:|||||||:||||||..|||||:||||||||||:|||||||||||||||
RBAM_011030__     51 LISDDEFKLNQLKDVLSGKLIKRDVPTKNIEYGKIENASGGTVRQRAKLV    100

BSNT_01861___    101 QGIDKDNAKKINTIIKNSGLKVKSQVQDDQVRVTGKNKDDLQQIISAVRG    150
                     ||||||||||||.:|||||||||||:|||||||||||||||||||:||||
RBAM_011030__    101 QGIDKDNAKKINAVIKNSGLKVKSQIQDDQVRVTGKNKDDLQQIIAAVRG    150

BSNT_01861___    151 ADLPIDVQFINFR    163
                     |||||||||||||
RBAM_011030__    151 ADLPIDVQFINFR    163


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