Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01861 and RBAM_011030

See Amino acid alignment / Visit BSNT_01861 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:35
# Commandline: needle
#    -asequence dna-align/BSNT_01861___yitK.1.9828.seq
#    -bsequence dna-align/RBAM_011030___yitk.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01861___yitK-RBAM_011030___yitk.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01861___yitK-RBAM_011030___yitk.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01861___yitK
# 2: RBAM_011030___yitk
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 493
# Identity:     401/493 (81.3%)
# Similarity:   401/493 (81.3%)
# Gaps:           2/493 ( 0.4%)
# Score: 1625.0
# 
#
#=======================================

BSNT_01861___      1 ATGGCAAAAGAAAGCTCATTTGATATTGTATCCAAGGTGGAATTGCCTGA     50
                     ||||||||||||||.||.|||||||||||||||||.||.|||||.||.||
RBAM_011030__      1 ATGGCAAAAGAAAGTTCTTTTGATATTGTATCCAAAGTTGAATTTCCCGA     50

BSNT_01861___     51 AGTGCAAAACGCAATCCAAATCGCACTGAAGGAAATCAGTACCCGATATG    100
                     ||||||.||.||.||.||.||..|.|||||.||||||.|.||.||.||||
RBAM_011030__     51 AGTGCAGAATGCGATTCAGATGACGCTGAAAGAAATCGGCACGCGCTATG    100

BSNT_01861___    101 ACTTTAAAGGCAGC-AAAAGCGACATTTCTTTAGATAAAGAGGAGCTGGT    149
                     |||||||||| |.| ||||||||..|..|||||||.||.||.||.||.||
RBAM_011030__    101 ACTTTAAAGG-ATCGAAAAGCGATGTAACTTTAGAAAAGGAAGAACTTGT    149

BSNT_01861___    150 CCTCGTTTCCGATGACGAATTCAAATTAAGCCAGCTGAAAGATGTGCTGG    199
                     |||..||||.||||||||.||.|||.|.|..|||||.||||||||||||.
RBAM_011030__    150 CCTGATTTCTGATGACGAGTTTAAACTGAATCAGCTCAAAGATGTGCTGA    199

BSNT_01861___    200 TCAGCAAATTGATTAAACGAAACGTACCGACAAAAAACATTGAGTACGGC    249
                     .|.||||..||||.|||||..||||.|||||.|||||||||||.||||||
RBAM_011030__    200 GCGGCAAGCTGATCAAACGGGACGTTCCGACGAAAAACATTGAATACGGC    249

BSNT_01861___    250 AAGGTTGAAAACGCGTCAGGCGGAACGGTGCGCCAGCGCGCAAAGCTTGT    299
                     ||..|.|||||.||.||.||.||.|||||||||||||||||.||||||||
RBAM_011030__    250 AAAATCGAAAATGCATCGGGAGGCACGGTGCGCCAGCGCGCGAAGCTTGT    299

BSNT_01861___    300 TCAAGGCATTGACAAGGACAACGCAAAAAAAATCAATACGATCATCAAAA    349
                     .||.||||||||.||.||||||||.|||||||||||..||.|.||.||||
RBAM_011030__    300 ACAGGGCATTGATAAAGACAACGCCAAAAAAATCAACGCGGTGATTAAAA    349

BSNT_01861___    350 ACTCCGGACTGAAAGTAAAGTCTCAGGTGCAGGATGATCAAGTGCGTGTC    399
                     |||||||..||||.||.|||||.|||.|.|||||.||.||||||||.|||
RBAM_011030__    350 ACTCCGGCTTGAAGGTCAAGTCGCAGATTCAGGACGACCAAGTGCGCGTC    399

BSNT_01861___    400 ACCGGAAAAAACAAAGATGACCTGCAGCAGATTATCTCAGCTGTGCGGGG    449
                     |||||||||||.||||||||.||||||||||||||..||||.||.||.||
RBAM_011030__    400 ACCGGAAAAAATAAAGATGATCTGCAGCAGATTATTGCAGCCGTCCGCGG    449

BSNT_01861___    450 AGCAGATCTGCCAATTGACGTTCAATTTATAAATTTCAGATAA    492
                     ||||||.|||||.|||||||||||||||||.|||||.||||||
RBAM_011030__    450 AGCAGACCTGCCGATTGACGTTCAATTTATTAATTTTAGATAA    492


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