Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01849 and RBAM_010990
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:34
# Commandline: needle
# -asequence pep-align/BSNT_01849.1.9828.seq
# -bsequence pep-align/RBAM_010990___yisT.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01849-RBAM_010990___yisT.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01849-RBAM_010990___yisT.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01849
# 2: RBAM_010990___yisT
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 194
# Identity: 78/194 (40.2%)
# Similarity: 114/194 (58.8%)
# Gaps: 30/194 (15.5%)
# Score: 457.0
#
#
#=======================================
BSNT_01849 1 MGCHSFAIERETDEKNEFLRKGGMLMTDAKQFYDYHSWANKKIFTHIENL 50
|:|..:.|.||.|||:::..|::.|
RBAM_010990__ 1 -------------------------MSDILKLYHYHRWANEQVIQHLKTL 25
BSNT_01849 51 PEETAYQEVKSVFPSVSDVLLHMCRADYIWLNVLSGVAYQEIIDSAGKLE 100
|..:..|::|||||:|:.||:|:.|||||||:||.|..:::|.....:.|
RBAM_010990__ 26 PAVSLQQKLKSVFPTVNAVLVHIYRADYIWLHVLYGETFEQIASQFDQFE 75
BSNT_01849 101 SAQGNMAAIKQHAAELESQYHDFFSRQTNLEQTFTMQHPKLGTLESTYAD 150
...|:..||:....||:.::.:|.....|.|...::.||:||||::||||
RBAM_010990__ 76 KLDGDFEAIEHRMTELDKEFSEFLKEMENPEGPISISHPRLGTLQTTYAD 125
BSNT_01849 151 TILHVVNHGTYHRGNVTAMLRQLGHSGVPTDYMYYLYEKRESKG 194
.|.||||||||||||:||||.|:|:.||||||:::.||.
RBAM_010990__ 126 VIRHVVNHGTYHRGNITAMLHQMGYKGVPTDYIFFSYES----- 164
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