Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01849 and RBAM_010990

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:34
# Commandline: needle
#    -asequence pep-align/BSNT_01849.1.9828.seq
#    -bsequence pep-align/RBAM_010990___yisT.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01849-RBAM_010990___yisT.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01849-RBAM_010990___yisT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01849
# 2: RBAM_010990___yisT
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 194
# Identity:      78/194 (40.2%)
# Similarity:   114/194 (58.8%)
# Gaps:          30/194 (15.5%)
# Score: 457.0
# 
#
#=======================================

BSNT_01849         1 MGCHSFAIERETDEKNEFLRKGGMLMTDAKQFYDYHSWANKKIFTHIENL     50
                                              |:|..:.|.||.|||:::..|::.|
RBAM_010990__      1 -------------------------MSDILKLYHYHRWANEQVIQHLKTL     25

BSNT_01849        51 PEETAYQEVKSVFPSVSDVLLHMCRADYIWLNVLSGVAYQEIIDSAGKLE    100
                     |..:..|::|||||:|:.||:|:.|||||||:||.|..:::|.....:.|
RBAM_010990__     26 PAVSLQQKLKSVFPTVNAVLVHIYRADYIWLHVLYGETFEQIASQFDQFE     75

BSNT_01849       101 SAQGNMAAIKQHAAELESQYHDFFSRQTNLEQTFTMQHPKLGTLESTYAD    150
                     ...|:..||:....||:.::.:|.....|.|...::.||:||||::||||
RBAM_010990__     76 KLDGDFEAIEHRMTELDKEFSEFLKEMENPEGPISISHPRLGTLQTTYAD    125

BSNT_01849       151 TILHVVNHGTYHRGNVTAMLRQLGHSGVPTDYMYYLYEKRESKG    194
                     .|.||||||||||||:||||.|:|:.||||||:::.||.     
RBAM_010990__    126 VIRHVVNHGTYHRGNITAMLHQMGYKGVPTDYIFFSYES-----    164


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