Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01849 and RBAM_010990
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:34
# Commandline: needle
# -asequence dna-align/BSNT_01849.1.9828.seq
# -bsequence dna-align/RBAM_010990___yisT.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01849-RBAM_010990___yisT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01849-RBAM_010990___yisT.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01849
# 2: RBAM_010990___yisT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 647
# Identity: 315/647 (48.7%)
# Similarity: 315/647 (48.7%)
# Gaps: 214/647 (33.1%)
# Score: 771.0
#
#
#=======================================
BSNT_01849 1 TTGGGGTGTCACTCTTTTGCAATTGAAAGAGAAACAGATGAAAAAAACGA 50
RBAM_010990__ 0 -------------------------------------------------- 0
BSNT_01849 51 ATTTCTTAGAAAAGGGGGCATGCTGATGACTGATGCAAAACAGTTT---- 96
|||..|.|||.|||
RBAM_010990__ 1 --------------------------------ATGTCAGACATTTTAAAG 18
BSNT_01849 97 ---TATGACTATCATTCTTGGGCAAACAAG-AAAATATTTACCCATATC- 141
|||.||||.||....||||||||..|| ||..||||.|.| |||
RBAM_010990__ 19 CTGTATCACTACCACAGATGGGCAAATGAGCAAGTTATTCAGC---ATCT 65
BSNT_01849 142 GAAAAC-CTGCCGGAGGAAACTGCCTATCA--AG-AAGTAAAGAGCGTAT 187
|||.|| |||||.|.|| .|.||.|| || || ||.|.||.||.||.|
RBAM_010990__ 66 GAAGACGCTGCCCGCGG--TCAGCTTA-CAGCAGAAACTGAAAAGTGTTT 112
BSNT_01849 188 TTCCTTCTGTCAGCGACGTGCTGCTTCATATGTGCAGGGCTGACTACATT 237
||||..||||.|.||.||||||..|.|||||.|.|.|||||||.||||||
RBAM_010990__ 113 TTCCGACTGTGAACGCCGTGCTTGTGCATATATACCGGGCTGATTACATT 162
BSNT_01849 238 TGGCTGAATGTTCTTTCGGGAGTGGCCTACCAAGAGAT----TATAGACA 283
|||||..|.||.||||..||||...|.|.|.||.|.|| |
RBAM_010990__ 163 TGGCTTCACGTGCTTTACGGAGAAACTTTCGAACAAATCGCCT------- 205
BSNT_01849 284 GCGCAG-----GCAAATT--AGAGTCCGCGCAAGGTAATATGGCAGCGAT 326
||||| .|||.|| |.||...| |.||..||.|.|..|||||
RBAM_010990__ 206 -CGCAGTTTGATCAATTTGAAAAGCTTG---ACGGAGATTTTGAGGCGAT 251
BSNT_01849 327 TAAAC--AGCACGCTG-CCGAGCTGGAGTCACAGTATCATGATTTCTTCA 373
|.||| ||.| || |.||.||||| ||.||.| ||||
RBAM_010990__ 252 TGAACATAGAA---TGACTGAACTGGA--CAAAGAA----------TTCA 286
BSNT_01849 374 GCCGCCAGACGAACTTAGAACAGACCTTCACAATGCA------------- 410
| ||||.||..||.||| ||||.|
RBAM_010990__ 287 G--------CGAATTTTTAAAAGA-------AATGGAGAACCCGGAAGGT 321
BSNT_01849 411 --------------ACATCCGAAACTAGGTACACTGGAATCA----ACCT 442
.||||||...||.||.||.|| ||| ||.|
RBAM_010990__ 322 CCGATCTCTATTTCTCATCCGCGCCTGGGGACGCT----TCAGACGACAT 367
BSNT_01849 443 ATGCAGACACCATCCTGCATGTCGTCAATCACGGCACTTACCACAGAGGG 492
||||.||....||||.||||||.||.|||||||||||.|||||..|.||.
RBAM_010990__ 368 ATGCCGATGTGATCCGGCATGTTGTGAATCACGGCACATACCATCGCGGC 417
BSNT_01849 493 AACGTAACCGCCATGCTGAGACAGCTGGGCCATTCAGGCGTACCTACTGA 542
||..|.|||||.|||||....||..|||||.||..||||||.||.|||||
RBAM_010990__ 418 AATATCACCGCGATGCTTCACCAAATGGGCTATAAAGGCGTGCCGACTGA 467
BSNT_01849 543 TTATATGTACTATTT----ATATGAGAAAAGAGAAAGCAAGGGCTAA 585
.||.|| |.||| |||.| ||.|| |||
RBAM_010990__ 468 CTACAT----TTTTTTCTCATACG----------AATCA-----TAA 495
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