Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01838 and RBAM_010940
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:33
# Commandline: needle
# -asequence pep-align/BSNT_01838___yisN.1.9828.seq
# -bsequence pep-align/RBAM_010940___yisN.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01838___yisN-RBAM_010940___yisN.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01838___yisN-RBAM_010940___yisN.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01838___yisN
# 2: RBAM_010940___yisN
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 208
# Identity: 111/208 (53.4%)
# Similarity: 139/208 (66.8%)
# Gaps: 35/208 (16.8%)
# Score: 573.0
#
#
#=======================================
BSNT_01838___ 1 ----------------MKRKQLLYTEERKWEYGTILIEDGVCLIENGEGD 34
||||| |::|:.||..||::||||:||:||.|||
RBAM_010940__ 1 MERTEEKKQTKETGTVMKRKQ-LFSEKNKWGRGTLMIEDGICLVENDEGD 49
BSNT_01838___ 35 ILLADTLQHSPIWVHHKGKWEQAGFQDQLVLAC------GEENISLSGGE 78
|||||:|.::.:.:...|:|:.|.. | |.:.|.|.|||
RBAM_010940__ 50 ILLADSLGNADVLMKRGGRWQPARI-------CGGAAEIGTDTIPLLGGE 92
BSNT_01838___ 79 RIRYEKSVKRPLMALLDSLDDETFLAFLQHLHSFGLSVFDCVFSYNKGVF 128
.|||||:|||||:.|||||||||||.||.|||.|||||:|||||||:.:|
RBAM_010940__ 93 EIRYEKAVKRPLLTLLDSLDDETFLLFLSHLHGFGLSVYDCVFSYNQALF 142
BSNT_01838___ 129 SNTSAGQGVSFYHFSNDTAQCAMQHHYSNEGTGDRFEWTASNGKRSIMYS 178
|: :||||||||.|.||||:|||..:.|..||||||||:|:||||||
RBAM_010940__ 143 SS----EGVSFYHFSADEAQCALQHHRGSSGKHDRFEWTASDGRRSIMYS 188
BSNT_01838___ 179 AVQRGRK- 185
|.::...
RBAM_010940__ 189 AARQDGTA 196
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