Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01835 and RBAM_010920

See DNA alignment / Visit BSNT_01835 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:33
# Commandline: needle
#    -asequence pep-align/BSNT_01835___yisL.1.9828.seq
#    -bsequence pep-align/RBAM_010920___yisL.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01835___yisL-RBAM_010920___yisL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01835___yisL-RBAM_010920___yisL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01835___yisL
# 2: RBAM_010920___yisL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 118
# Identity:     104/118 (88.1%)
# Similarity:   112/118 (94.9%)
# Gaps:           0/118 ( 0.0%)
# Score: 543.0
# 
#
#=======================================

BSNT_01835___      1 MTHLHITTWVVALILLFVSYSLYSSGSAKGAKITHMILRLFYILIILTGA     50
                     |||.|||:|||||||:||||.||.||.||||||||||||||||:||||||
RBAM_010920__      1 MTHWHITSWVVALILVFVSYGLYGSGKAKGAKITHMILRLFYIIIILTGA     50

BSNT_01835___     51 ELFVRFANWNGEYAGKMILGIITIGLMEMLLIRKKKEKSTGGLWIGFVIV    100
                     |||||||||||||||||:||||||||||||:|||||.||||||||||:||
RBAM_010920__     51 ELFVRFANWNGEYAGKMLLGIITIGLMEMLVIRKKKGKSTGGLWIGFIIV    100

BSNT_01835___    101 LLLTVLLGLHLPIGFQLF    118
                     |:|||||||||||||.:|
RBAM_010920__    101 LVLTVLLGLHLPIGFHVF    118


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