Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01835 and RBAM_010920
See
Amino acid alignment /
Visit
BSNT_01835 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:33
# Commandline: needle
# -asequence dna-align/BSNT_01835___yisL.1.9828.seq
# -bsequence dna-align/RBAM_010920___yisL.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01835___yisL-RBAM_010920___yisL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01835___yisL-RBAM_010920___yisL.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01835___yisL
# 2: RBAM_010920___yisL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 359
# Identity: 293/359 (81.6%)
# Similarity: 293/359 (81.6%)
# Gaps: 4/359 ( 1.1%)
# Score: 1196.0
#
#
#=======================================
BSNT_01835___ 1 ATGACACACCTACATATTACGACATGGGTGGTAGCGCTGATTCTGCTTTT 50
||||||||....||||||||..|||||||.||.|||||.||.|||.|.||
RBAM_010920__ 1 ATGACACATTGGCATATTACTTCATGGGTCGTTGCGCTTATCCTGGTGTT 50
BSNT_01835___ 51 CGTCAGCTACTCGCTGTATTCG--TCAGGAAGTGCAAAGGGCGCAAAAAT 98
.|||||||||..|||||| || ||.||||..||.||||||||||||||
RBAM_010920__ 51 TGTCAGCTACGGGCTGTA--CGGTTCCGGAAAAGCGAAGGGCGCAAAAAT 98
BSNT_01835___ 99 CACTCATATGATTCTGCGGTTATTCTATATCCTTATTATTTTGACAGGAG 148
.||.||||||||||||||.||||||||.||..||||||||.||||.||||
RBAM_010920__ 99 TACGCATATGATTCTGCGCTTATTCTACATTATTATTATTCTGACCGGAG 148
BSNT_01835___ 149 CTGAGCTGTTTGTCCGTTTCGCCAACTGGAACGGAGAATACGCCGGCAAA 198
|||||||.|||||||||||.||.||.||||||||||||||||||||.|||
RBAM_010920__ 149 CTGAGCTTTTTGTCCGTTTTGCGAATTGGAACGGAGAATACGCCGGAAAA 198
BSNT_01835___ 199 ATGATTCTGGGCATTATCACCATCGGCCTGATGGAAATGCTCCTCATCCG 248
|||.|.||.|||||.||.||||||||.|||||||||||||||.|||||||
RBAM_010920__ 199 ATGCTGCTCGGCATCATTACCATCGGACTGATGGAAATGCTCGTCATCCG 248
BSNT_01835___ 249 CAAGAAAAAAGAAAAATCAACAGGAGGCCTGTGGATCGGCTTCGTCATTG 298
|||||||||||..||||||||.||.||.|||||||||||.||..|.||.|
RBAM_010920__ 249 CAAGAAAAAAGGCAAATCAACCGGCGGACTGTGGATCGGTTTTATTATCG 298
BSNT_01835___ 299 TCCTTTTGCTGACAGTGCTGCTCGGTCTGCATTTGCCAATTGGTTTTCAA 348
|.||..|.|||||.|||||||||||.||.||||||||.||.||.|||||.
RBAM_010920__ 299 TGCTCGTCCTGACGGTGCTGCTCGGCCTTCATTTGCCGATCGGCTTTCAC 348
BSNT_01835___ 349 TTGTTTTAA 357
.|.||||||
RBAM_010920__ 349 GTATTTTAA 357
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.