Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01834 and RBAM_010910

See DNA alignment / Visit BSNT_01834 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:33
# Commandline: needle
#    -asequence pep-align/BSNT_01834___yisK.1.9828.seq
#    -bsequence pep-align/RBAM_010910___yisK.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01834___yisK-RBAM_010910___yisK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01834___yisK-RBAM_010910___yisK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01834___yisK
# 2: RBAM_010910___yisK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 301
# Identity:     251/301 (83.4%)
# Similarity:   276/301 (91.7%)
# Gaps:           0/301 ( 0.0%)
# Score: 1332.0
# 
#
#=======================================

BSNT_01834___      1 MKFATGELYNRMFVGLIIDDEKIMDLQKAEKKLFELETIPGSLIECIAEG     50
                     ||||||||.:|.||||||||:||:|||||||||||||||||||||||.:|
RBAM_010910__      1 MKFATGELNSRTFVGLIIDDDKILDLQKAEKKLFELETIPGSLIECIQKG     50

BSNT_01834___     51 DKFVAHARQLAEWAKKPNDELGSFMYSLSEVKLHAPIPKPSKNIICIGKN    100
                     |||||||.||||||||||||.|||||:||:|||.||||:|.||:||||||
RBAM_010910__     51 DKFVAHAGQLAEWAKKPNDESGSFMYALSDVKLCAPIPRPPKNVICIGKN    100

BSNT_01834___    101 YRDHAIEMGSEADIPEHPMVFTKSPVTVTGHGDIVKSHEEVTSQLDYEGE    150
                     |||||:|||||||||||||||||:|..|||||:.|.||.:||.|||||||
RBAM_010910__    101 YRDHAVEMGSEADIPEHPMVFTKAPAAVTGHGETVDSHLDVTEQLDYEGE    150

BSNT_01834___    151 LAVVIGKSGTRISKEDAYDHVFGYTIVNDITARDLQKRHKQFFIGKSLDT    200
                     |||:|.|||:.||||.|.||:||||||||||||||||:||||||||||||
RBAM_010910__    151 LAVIISKSGSHISKEHALDHIFGYTIVNDITARDLQKKHKQFFIGKSLDT    200

BSNT_01834___    201 TCPMGPVLVHKSSIQEPERLKVETRVNGELRQSGSASDMIFSIPELIETL    250
                     |||||||:||||::.:|:.||||||||||||||||..||||.|.:|||||
RBAM_010910__    201 TCPMGPVIVHKSAVSDPQSLKVETRVNGELRQSGSTGDMIFPIAQLIETL    250

BSNT_01834___    251 SKGMTLEAGDIIATGTPSGVGKGFTPPKFLRSGDKIDITIDPIGTLSNQI    300
                     ||||||||||||||||||||||||.|||||:.||:|||||:|||||||||
RBAM_010910__    251 SKGMTLEAGDIIATGTPSGVGKGFKPPKFLKPGDRIDITIEPIGTLSNQI    300

BSNT_01834___    301 G    301
                     |
RBAM_010910__    301 G    301


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