Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01834 and RBAM_010910
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:33
# Commandline: needle
# -asequence dna-align/BSNT_01834___yisK.1.9828.seq
# -bsequence dna-align/RBAM_010910___yisK.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01834___yisK-RBAM_010910___yisK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01834___yisK-RBAM_010910___yisK.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01834___yisK
# 2: RBAM_010910___yisK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 910
# Identity: 706/910 (77.6%)
# Similarity: 706/910 (77.6%)
# Gaps: 8/910 ( 0.9%)
# Score: 2685.0
#
#
#=======================================
BSNT_01834___ 1 ATGAAATTTGCGACAGGGGAACTTTACAACCGAATGTTTGTCGGCCTGAT 50
|||||||||||||||||||||||..|||.|||||..||||||||.|||||
RBAM_010910__ 1 ATGAAATTTGCGACAGGGGAACTGAACAGCCGAACATTTGTCGGTCTGAT 50
BSNT_01834___ 51 CATTGACGATGAGAAAATTATGGATTTGCAGAAGGCTGAAAAAAAACTGT 100
||||||.|||||.|||||..|.|||.||||.|||||||||||||||.|||
RBAM_010910__ 51 CATTGATGATGACAAAATCTTAGATCTGCAAAAGGCTGAAAAAAAATTGT 100
BSNT_01834___ 101 TTGAACTTGAGACGATTCCGGGATCGCTGATTGAATGTATCGCAGAAGGG 150
||||||||||||||||||||||.||||||||.||.||.||...|.||||.
RBAM_010910__ 101 TTGAACTTGAGACGATTCCGGGTTCGCTGATCGAGTGCATTCAAAAAGGA 150
BSNT_01834___ 151 GATAAATTCGTTGCGCATGCAAGGCAGCTGGCCGAGTGGGCAAAGAAACC 200
|||||.||.||.||||||||..|.|||||.||.||.|||||.||.|||||
RBAM_010910__ 151 GATAAGTTTGTCGCGCATGCCGGACAGCTTGCGGAATGGGCGAAAAAACC 200
BSNT_01834___ 201 GAATGATGAGCTGGGATCATTTATGTATTCATTATCTGAGGTGAAGCTTC 250
||||||||||..|||.||||||||||||.|..|.|||||.||.||||||.
RBAM_010910__ 201 GAATGATGAGTCGGGTTCATTTATGTATGCGCTGTCTGACGTAAAGCTTT 250
BSNT_01834___ 251 ATGCACCCATTCCGAAGCCATCAAAAAATATCATCTGCATCGGCAAAAAC 300
..||.||.|||||||..||..||||.||..|.|||||||||||.|||||.
RBAM_010910__ 251 GCGCGCCTATTCCGAGACCTCCAAAGAACGTGATCTGCATCGGGAAAAAT 300
BSNT_01834___ 301 TACCGGGATCACGCGATTGAAATGGGGAGCGAGGCTGATATTCCGGAGCA 350
||.||.|||||.||..|||||||||||||.|||||.|||||.||||||||
RBAM_010910__ 301 TATCGTGATCATGCTGTTGAAATGGGGAGTGAGGCGGATATACCGGAGCA 350
BSNT_01834___ 351 TCCGATGGTATTTACAAAATCGCCGGTAACGGTTACGGGGCATGGTGATA 400
|||.|||||.|||||.|||.|.||.|...|.|||||.||.||.||.||.|
RBAM_010910__ 351 TCCCATGGTTTTTACGAAAGCCCCCGCTGCCGTTACAGGACACGGAGAAA 400
BSNT_01834___ 401 TCGTAAAGAGCCA--TGAAGAGGTTACCTCTCAGCTTGATTATGAGGGAG 448
..||..|.||||| || ||.||.||....||||||||||||||.||.|
RBAM_010910__ 401 CAGTGGACAGCCACTTG--GACGTAACGGAGCAGCTTGATTATGAAGGGG 448
BSNT_01834___ 449 AACTTGCTGTCGTGATCGGAAAAAGCGGGACTCGCATTTCAAAAGAAGAT 498
|.|||||.||..|.||...|||||||||..|.|.|||.||.||||||.||
RBAM_010910__ 449 AGCTTGCGGTAATCATATCAAAAAGCGGATCGCACATCTCCAAAGAACAT 498
BSNT_01834___ 499 GCATATGACCATGTTTTCGGATATACGATTGTGAATGATATCACGGCGCG 548
||...|||.|||.|.|||||.|||||.|||||.||||||||.||.|||||
RBAM_010910__ 499 GCGCTTGATCATATATTCGGCTATACAATTGTAAATGATATAACAGCGCG 548
BSNT_01834___ 549 TGATCTGCAAAAAAGGCATAAGCAGTTTTTTATCGGAAAAAGCTTGGATA 598
.||||||||.||||..|||||.||||||||||||||.||||||.|.||||
RBAM_010910__ 549 CGATCTGCAGAAAAAACATAAACAGTTTTTTATCGGCAAAAGCCTCGATA 598
BSNT_01834___ 599 CGACATGTCCGATGGGGCCCGTGCTTGTACATAAATCATCTATTCAG-GA 647
|||||||.||||||||.||.||..||||||||||.||..|| .|||| ||
RBAM_010910__ 599 CGACATGCCCGATGGGCCCGGTCATTGTACATAAGTCGGCT-GTCAGTGA 647
BSNT_01834___ 648 GCCAGAGCGCCTCAAGGTTGAAACAAGAGTCAACGGCGAGCTGCGCCAAT 697
.||..|..||||.||.||||||||..|.||.|||||.||.||||||||||
RBAM_010910__ 648 TCCGCAAAGCCTGAAAGTTGAAACGCGGGTGAACGGAGAACTGCGCCAAT 697
BSNT_01834___ 698 CCGGTTCGGCAAGCGATATGATCTTTTCC-ATTCCGGAATTAATTGAAAC 746
|.||.||..|..|.||.||||| |||||| ||..|..|||||||.|||||
RBAM_010910__ 698 CAGGATCAACGGGTGACATGAT-TTTTCCGATAGCTCAATTAATCGAAAC 746
BSNT_01834___ 747 CCTCTCAAAGGGGATGACGCTTGAAGCGGGCGACATTATTGCCACCGGTA 796
.||.|||||.||.||||||||||||||.||.||||||||.||.||.||.|
RBAM_010910__ 747 GCTGTCAAAAGGAATGACGCTTGAAGCCGGTGACATTATAGCGACGGGGA 796
BSNT_01834___ 797 CGCCGTCTGGTGTCGGCAAGGGGTTTACGCCTCCAAAATTCTTGCGGTCA 846
|||||||.||||||||.||.|||||||.|||.||.|||||.||...|.|.
RBAM_010910__ 797 CGCCGTCCGGTGTCGGAAAAGGGTTTAAGCCGCCGAAATTTTTAAAGCCG 846
BSNT_01834___ 847 GGTGACAAAATTGATATTACAATTGATCCGATCGGAACGCTGTCAAACCA 896
||.|||...|||||.|||||||||||.||||||||.||||||||.|||||
RBAM_010910__ 847 GGAGACCGCATTGACATTACAATTGAACCGATCGGCACGCTGTCGAACCA 896
BSNT_01834___ 897 AATTGGCTGA 906
|||.||.|.|
RBAM_010910__ 897 AATCGGATAA 906
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