Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01829 and RBAM_010900

See DNA alignment / Visit BSNT_01829 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:33
# Commandline: needle
#    -asequence pep-align/BSNT_01829___yisI.1.9828.seq
#    -bsequence pep-align/RBAM_010900___yisI.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01829___yisI-RBAM_010900___yisI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01829___yisI-RBAM_010900___yisI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01829___yisI
# 2: RBAM_010900___yisI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 72
# Identity:      31/72 (43.1%)
# Similarity:    41/72 (56.9%)
# Gaps:          17/72 (23.6%)
# Score: 124.0
# 
#
#=======================================

BSNT_01829___      1 MNSKIEEMRITLIETAQKYGMNSKETIQCSQELDILLN-------TRIKE     43
                     || ||||.|:||.|||||:|:|:.|||:||||||.|||       .:.|:
RBAM_010900__      1 MN-KIEEKRLTLFETAQKFGINATETIRCSQELDSLLNGCRGGLIQQTKD     49

BSNT_01829___     44 EMIF-GRYLENSRM--------     56
                     ..:. ...:|:.|.        
RBAM_010900__     50 SGLNPAAQIEHGRTAGKKEAFS     71


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