Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01829 and RBAM_010900
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:33
# Commandline: needle
# -asequence dna-align/BSNT_01829___yisI.1.9828.seq
# -bsequence dna-align/RBAM_010900___yisI.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01829___yisI-RBAM_010900___yisI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01829___yisI-RBAM_010900___yisI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01829___yisI
# 2: RBAM_010900___yisI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 230
# Identity: 118/230 (51.3%)
# Similarity: 118/230 (51.3%)
# Gaps: 73/230 (31.7%)
# Score: 293.5
#
#
#=======================================
BSNT_01829___ 1 ATGAACAGTAAAATTGAAGAAATGAGGATCACACTAATTGAAACCGCACA 50
|||||| |||||||||||||..||..|.||..||.|.||.||.||.||
RBAM_010900__ 1 ATGAAC---AAAATTGAAGAAAAAAGATTAACTTTATTCGAGACAGCGCA 47
BSNT_01829___ 51 AAAATACGGCATGAATTCAAAAGAAACGATTCA-ATGCAGCCAAGAGCTG 99
|||||.|||.||.|||.|||..||.||.| ||| .||||||||.||||||
RBAM_010900__ 48 AAAATTCGGAATCAATGCAACGGAGACCA-TCAGGTGCAGCCAGGAGCTG 96
BSNT_01829___ 100 GATATCCTGCTGAA----TACCCGG--------ATTAAAGAA--GAAA-- 133
||.|.|||..|.|| |.||.|| ||..||.|| ||||
RBAM_010900__ 97 GACAGCCTTTTAAACGGGTGCCGGGGCGGGCTCATCCAACAAACGAAAGA 146
BSNT_01829___ 134 --------TGATTTTTG----GG------AGATATCTTGAAAACTCCCGT 165
||| || ||| ||||..||..|||.
RBAM_010900__ 147 CAGCGGGCTGA------ACCCGGCCGCACAGA----TTGAGCACGGCCGC 186
BSNT_01829___ 166 A----TGTAA-------------------- 171
| .|.||
RBAM_010900__ 187 ACCGCAGGAAAAAAAGAGGCTTTCTCATAA 216
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