Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01825 and RBAM_010880

See DNA alignment / Visit BSNT_01825 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:33
# Commandline: needle
#    -asequence pep-align/BSNT_01825___gerPB.1.9828.seq
#    -bsequence pep-align/RBAM_010880___gerPB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01825___gerPB-RBAM_010880___gerPB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01825___gerPB-RBAM_010880___gerPB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01825___gerPB
# 2: RBAM_010880___gerPB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 78
# Identity:      56/78 (71.8%)
# Similarity:    63/78 (80.8%)
# Gaps:           1/78 ( 1.3%)
# Score: 277.0
# 
#
#=======================================

BSNT_01825___      1 MNFYINQTIQINYLRLESISNSSILQIGSAGSIKSLSNLYNTGSYVEPAP     50
                     ||||:||:|.|||:|:||:|||||||||||||||||||||||||||||||
RBAM_010880__      1 MNFYVNQSIHINYMRVESVSNSSILQIGSAGSIKSLSNLYNTGSYVEPAP     50

BSNT_01825___     51 EVSGSGQPLQL-QEPDTGSLVPLQPPGR     77
                     .|:...|.:.. ..|.|.|.||||||.|
RBAM_010880__     51 PVTAGQQTVTTGGGPGTSSFVPLQPPSR     78


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