Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01817 and RBAM_010830

See DNA alignment / Visit BSNT_01817 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:33
# Commandline: needle
#    -asequence pep-align/BSNT_01817___yisB.1.9828.seq
#    -bsequence pep-align/RBAM_010830___yisB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01817___yisB-RBAM_010830___yisB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01817___yisB-RBAM_010830___yisB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01817___yisB
# 2: RBAM_010830___yisB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 100
# Identity:      80/100 (80.0%)
# Similarity:    86/100 (86.0%)
# Gaps:           3/100 ( 3.0%)
# Score: 439.0
# 
#
#=======================================

BSNT_01817___      1 MAKQTAGICELCGRSDVQLTEHHLTPKEEGGTFLPTAMLCIPCHKQIHAL     50
                     ||....|.||||||..|:||||||||||||||||||||||||||||:|||
RBAM_010830__      1 MADSAEGTCELCGRHHVRLTEHHLTPKEEGGTFLPTAMLCIPCHKQVHAL     50

BSNT_01817___     51 YTNQELAVRLNGMAELRSDPELARFVKWIRKQPPEKLIKTKKSNERKKKK    100
                     |||||||.||.|:.|||.||:||||||||||||||||:||||:||||   
RBAM_010830__     51 YTNQELAARLAGIEELRRDPKLARFVKWIRKQPPEKLVKTKKANERK---     97


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