Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01807 and RBAM_010770
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:30
# Commandline: needle
# -asequence pep-align/BSNT_01807___yhjR.1.9828.seq
# -bsequence pep-align/RBAM_010770___yhjR.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01807___yhjR-RBAM_010770___yhjR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01807___yhjR-RBAM_010770___yhjR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01807___yhjR
# 2: RBAM_010770___yhjR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 169
# Identity: 76/169 (45.0%)
# Similarity: 102/169 (60.4%)
# Gaps: 24/169 (14.2%)
# Score: 394.0
#
#
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BSNT_01807___ 1 MHYSYYPYPVPYREDPVLIRNLQKAINGEFSAIQCYRKLAELAHSDEVRK 50
||.:::.|.....:|.|||::|.|:||||:||:.||..|||.|.:.|:|:
RBAM_010770__ 1 MHENFFHYTAFCSDDSVLIKDLVKSINGEYSAVICYSILAEKAPTAEIRR 50
BSNT_01807___ 51 QIEEIRRDEIRHLREFSTLYGSITGKHIMPKQTEECPDNFTRGLDAAFKD 100
:||.||.:|:|||..||:||.|||||.:.|||||.||..:..||.|||.|
RBAM_010770__ 51 RIEHIREEEVRHLHAFSSLYTSITGKQLTPKQTEHCPHTYREGLRAAFYD 100
BSNT_01807___ 101 EQETVDFYLRAAEETSNLKAKGVFTRAARDEQNHAVWFLYYLMER----- 145
||:|.||||:|::...:.:||.:|.|.|.|||.|||||||.:...
RBAM_010770__ 101 EQKTNDFYLQASDRAVHPEAKRLFARTAFDEQRHAVWFLYDMAHSPFHHT 150
BSNT_01807___ 145 ------------------- 145
RBAM_010770__ 151 GGTVSNAPNTSYTEVNTGK 169
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