Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01776 and RBAM_010690

See DNA alignment / Visit BSNT_01776 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:29
# Commandline: needle
#    -asequence pep-align/BSNT_01776___yhjD.1.9828.seq
#    -bsequence pep-align/RBAM_010690___yhjD.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01776___yhjD-RBAM_010690___yhjD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01776___yhjD-RBAM_010690___yhjD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01776___yhjD
# 2: RBAM_010690___yhjD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 123
# Identity:      78/123 (63.4%)
# Similarity:    88/123 (71.5%)
# Gaps:           4/123 ( 3.3%)
# Score: 382.0
# 
#
#=======================================

BSNT_01776___      1 MPNLQEEIYDLIERALFLPMAITIFNRDLAGIEESTLKLKHPYKQLISES     50
                     ||:::....||||:.||||||..|.||||..::....|||.|||||||.|
RBAM_010690__      1 MPDIRSGTRDLIEKGLFLPMAAAILNRDLEALDSCPFKLKQPYKQLISCS     50

BSNT_01776___     51 LKIAQKDLMEVRKELRKRKIAIRETERDEAFTLYTFVIDGYEENHRYFNP    100
                     ||:|||||.:||||||||||.|.|.|||||||||...|:||||.||||||
RBAM_010690__     51 LKLAQKDLSDVRKELRKRKIKIYEAERDEAFTLYICTINGYEEKHRYFNP    100

BSNT_01776___    101 RIREQVSELLTYYLFAPDRLRAF    123
                     ||||||:.||.|||.....    
RBAM_010690__    101 RIREQVTALLEYYLSLATI----    119


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