Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00990 and RBAM_010620

See DNA alignment / Visit BSNT_00990 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:40
# Commandline: needle
#    -asequence pep-align/BSNT_00990___ydhG.1.9828.seq
#    -bsequence pep-align/RBAM_010620.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00990___ydhG-RBAM_010620.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00990___ydhG-RBAM_010620.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00990___ydhG
# 2: RBAM_010620
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 123
# Identity:      76/123 (61.8%)
# Similarity:    93/123 (75.6%)
# Gaps:           0/123 ( 0.0%)
# Score: 432.0
# 
#
#=======================================

BSNT_00990___      1 MDVFSEYLAGIDDPFHQERTEEVLTWIKDKYPNLHTEIKWNQPMFTDHGT     50
                     ||||.:||:.||.|.|:.|.||:|:|..|::|||..:||||.||||||||
RBAM_010620        1 MDVFKDYLSSIDSPDHRLRMEEILSWTADQFPNLEAQIKWNTPMFTDHGT     50

BSNT_00990___     51 FIIGFSVSKKHLAVAPEKVTIAHVEDDIVKAGYDYTEQLIRIPWNGPVDY    100
                     |||||:.:|.|::|:||:..|||..|||..|||..|.:|.||.|..||.|
RBAM_010620       51 FIIGFAAAKHHVSVSPEEAGIAHFTDDIACAGYSATSRLFRIQWTEPVHY    100

BSNT_00990___    101 TLLEKMIEFNILDKADCSTFWRK    123
                     .|||:||:|||.||||||.||||
RBAM_010620      101 ELLERMIQFNIQDKADCSAFWRK    123


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