Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01760 and RBAM_010550
See
DNA alignment /
Visit
BSNT_01760 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:28
# Commandline: needle
# -asequence pep-align/BSNT_01760___yhfU.1.9828.seq
# -bsequence pep-align/RBAM_010550___yhfU.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01760___yhfU-RBAM_010550___yhfU.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01760___yhfU-RBAM_010550___yhfU.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01760___yhfU
# 2: RBAM_010550___yhfU
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 186
# Identity: 119/186 (64.0%)
# Similarity: 152/186 (81.7%)
# Gaps: 1/186 ( 0.5%)
# Score: 629.0
#
#
#=======================================
BSNT_01760___ 1 MLKLIDMMHIAIFTALMAVLGFMPPLFLSFTPVPITLQTLGVMLAGSILR 50
:||.:|||||:|||:|.:||.:||||||||||||||||:||:|:||||:
RBAM_010550__ 1 -MKLTEMMHIAVFTAIMGLLGLLPPLFLSFTPVPITLQTIGVLLSGSILK 49
BSNT_01760___ 51 PKSAFLSQLVFLLLVAFGAPLLPGGRGGFGVFFGPSAGFLIAYPLASWLI 100
||:||||||:|||:||.|||||.|||||||||||||||:|||||||:.|:
RBAM_010550__ 50 PKAAFLSQLLFLLIVACGAPLLSGGRGGFGVFFGPSAGYLIAYPLAALLL 99
BSNT_01760___ 101 SLAANRLRKVTVLRLFFTHIVFGIIFIYLLGIPVQAFIMHIDLSQAAFMS 150
||:...||...|..||....:||::|:|::|||||||:||||:..|..:|
RBAM_010550__ 100 SLSIQGLRSAAVPHLFIRQFLFGVLFLYVIGIPVQAFMMHIDILTAVKLS 149
BSNT_01760___ 151 LAYVPGDLIKAAVSAFLAIKITQALSLSDTMFTKGG 186
|.||||||:|||.::|.|::|.:.|..|..:.|||.
RBAM_010550__ 150 LIYVPGDLLKAAAASFAAVRIRKTLQASRLLPTKGS 185
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.