Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01759 and RBAM_010540
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:28
# Commandline: needle
# -asequence pep-align/BSNT_01759___yhfT.1.9828.seq
# -bsequence pep-align/RBAM_010540___yhfT.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01759___yhfT-RBAM_010540___yhfT.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01759___yhfT-RBAM_010540___yhfT.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01759___yhfT
# 2: RBAM_010540___yhfT
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 493
# Identity: 301/493 (61.1%)
# Similarity: 366/493 (74.2%)
# Gaps: 29/493 ( 5.9%)
# Score: 1571.0
#
#
#=======================================
BSNT_01759___ 1 MTITHTYSSTAETSPGRVAIQTESEQITYHDWDRLVSQTANWLRSQPSMP 50
.||.:||.||..:|.::|||||:|||||..|:|||:||||||.|....|
RBAM_010540__ 1 -MITSSYSDTAGQAPEQIAIQTETEQITYQTWNRLVNQTANWLGSLSGKP 49
BSNT_01759___ 51 NRVAILLPNSLAFLQLFAGATAAGCTAIPIDTRWSPAECKERLSISNADL 100
..:||||||.:.||||||||..|||||:|:|.|.:.||..::|.||...|
RBAM_010540__ 50 ENIAILLPNGIPFLQLFAGAAHAGCTAVPLDPRSAAAELADQLHISKTGL 99
BSNT_01759___ 101 VVTLAFFKNKLTDSQTPVVLLDNCMADISEATADPLPTIDPEH------- 143
|:.......:|...:|||:|.|.|. |.|:.|.
RBAM_010540__ 100 VICDRRLSGRLDGVKTPVILWDECR-----------PLIEAEKTEGAFIK 138
BSNT_01759___ 144 ----PFYMGFTSGSTGKPKAFTRSHRSWIESFTCTETDFSISSNDTVLIP 189
|||.||||||||||||||||||||:|||:||:.:|.||.:|.||:|
RBAM_010540__ 139 NAGLPFYTGFTSGSTGKPKAFTRSHRSWLESFSCTKREFGISPDDKVLVP 188
BSNT_01759___ 190 GTLMSSHFLYGAVSTLFLGGTVCLLKKFSPAKAKEWLCRESISVLYTVPT 239
|||.|||||||||||||:||||.|.:||:||..|:.| ....|||||||
RBAM_010540__ 189 GTLRSSHFLYGAVSTLFIGGTVILQRKFNPAGMKDRL--RQADVLYTVPT 236
BSNT_01759___ 240 MTDALARIEGFPDSPVKIISSGADWPAESKEKLAAAWPHLKLYDFYGTSE 289
|||||..:|.|||:|:|:|||||||||.||:.|:..:|||:|||||||||
RBAM_010540__ 237 MTDALLSLEAFPDTPLKVISSGADWPASSKQALSERYPHLRLYDFYGTSE 286
BSNT_01759___ 290 LSFVTFSSPEDSKRKPHSAGRPFHNVRIEILNAGGERCQPGEIGKIFVKS 339
||||.|.|||||.|||.:|||||.||.|||...|||||.|||.|||||.|
RBAM_010540__ 287 LSFVAFLSPEDSARKPDAAGRPFENVTIEIRRPGGERCMPGETGKIFVNS 336
BSNT_01759___ 340 PMRFSGYVNGSTPDE--WMTVDDMGYVDEEGFLYISGRENGMIVYGGLNI 387
||:||||:||:.||: |||||||||:|.||:|||.||||||||.||||:
RBAM_010540__ 337 PMKFSGYINGAKPDDSGWMTVDDMGYIDREGYLYIEGRENGMIVSGGLNV 386
BSNT_01759___ 388 FPEEIERVLLACPEVESAAVVGIPDEYWGEIAVAVILGNANARTLKAWCK 437
|||||||||..||.|..|||:||||:|||.||||||.|:||.:.||..|:
RBAM_010540__ 387 FPEEIERVLNRCPGVRKAAVIGIPDDYWGSIAVAVIDGHANVKELKKQCR 436
BSNT_01759___ 438 QKLASYKIPKKWVFADSLPETSSGKIARSRVKKWLEESVQYK- 479
::||:|||||||:|:: :|||:.|||||:.|:|..::.:::|
RBAM_010540__ 437 EQLAAYKIPKKWLFSE-IPETAGGKIARAAVQKQAKDMMEWKL 478
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