Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01757 and RBAM_010530

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:28
# Commandline: needle
#    -asequence pep-align/BSNT_01757___yhfS.1.9828.seq
#    -bsequence pep-align/RBAM_010530___yhfS.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01757___yhfS-RBAM_010530___yhfS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01757___yhfS-RBAM_010530___yhfS.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01757___yhfS
# 2: RBAM_010530___yhfS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 364
# Identity:     260/364 (71.4%)
# Similarity:   302/364 (83.0%)
# Gaps:           1/364 ( 0.3%)
# Score: 1322.0
# 
#
#=======================================

BSNT_01757___      1 MNAVIIDAKRTIFGNQNGLLKPFLPEDLAAPIIRCLSRKLEDQVDEVILG     50
                     |.|||.|||||||..:|||||..||||||||:||.|||.:.:.:|||::|
RBAM_010530__      1 MEAVITDAKRTIFARENGLLKDCLPEDLAAPLIRHLSRNMPEDIDEVLIG     50

BSNT_01757___     51 NATGRGGNLARLSALQAGLPLSVPGMTIDRQCGSGLEAVRYACSLIQAGA    100
                     |||||||||||||||.|||||||.|.||||||||||:|||.||..::|||
RBAM_010530__     51 NATGRGGNLARLSALAAGLPLSVSGTTIDRQCGSGLDAVRVACHFVKAGA    100

BSNT_01757___    101 GTMYIAGGSESSSQSPFSERARFSPDAIGDPDMGIAAEYTAARYSISRSM    150
                     |..|||||:||||:||||.||||||:.||||||||||||||..|.::|.|
RBAM_010530__    101 GRTYIAGGAESSSRSPFSSRARFSPEHIGDPDMGIAAEYTAQAYGVTRKM    150

BSNT_01757___    151 QDEYALLSHQRSRNAHEEGFYREEVVALGELETDEAFLKTRPIEAIIPRA    200
                     ||||||||::||..|||:|.||.|::.......||..||.|.:|.:|.||
RBAM_010530__    151 QDEYALLSYERSIKAHEDGLYRPEILPCHGFAADENMLKKRNMEPLISRA    200

BSNT_01757___    201 KPVFDTSSGTVTAANSSGIADGAAALLVMEEEKAAALGLKPVLRFIGSAV    250
                     ||||. |.|:||||||.||:|||||:.||||:||.:|||||.||||||||
RBAM_010530__    201 KPVFQ-SGGSVTAANSCGISDGAAAVCVMEEQKARSLGLKPGLRFIGSAV    249

BSNT_01757___    251 SGIHPNYPPAAPVDAIRNLLHTHDVTPEDIGLFEINEAFAVKICVCSQEL    300
                     ||:||:||.||||.|::.||...|::|:||.::||||||||||||.||:|
RBAM_010530__    250 SGVHPHYPSAAPVYAVKKLLKERDLSPDDIDIYEINEAFAVKICVFSQQL    299

BSNT_01757___    301 GIPFSKINVRGGALALGHPYGASGAALVTRLFYEAKRRTDCQYVVAAIGS    350
                     .:|:|||||||||||:||||||||||||||||||||||.|.:|..|||||
RBAM_010530__    300 RVPYSKINVRGGALAVGHPYGASGAALVTRLFYEAKRRPDARYAAAAIGS    349

BSNT_01757___    351 GGGIGLALLFEVLA    364
                     |||:|||||||||.
RBAM_010530__    350 GGGVGLALLFEVLT    363


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