Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01741 and RBAM_010450
See
DNA alignment /
Visit
BSNT_01741 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:26
# Commandline: needle
# -asequence pep-align/BSNT_01741___yhfJ.1.9828.seq
# -bsequence pep-align/RBAM_010450___yhfJ.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01741___yhfJ-RBAM_010450___yhfJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01741___yhfJ-RBAM_010450___yhfJ.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01741___yhfJ
# 2: RBAM_010450___yhfJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 331
# Identity: 283/331 (85.5%)
# Similarity: 302/331 (91.2%)
# Gaps: 0/331 ( 0.0%)
# Score: 1503.0
#
#
#=======================================
BSNT_01741___ 1 MLFIDNQNINDPRINLAIEEYCVKHLDPEQQYLLFYVNQPSIIIGKNQNT 50
|||||||||.||||||||||||||||||||.|||||||||||||||||||
RBAM_010450__ 1 MLFIDNQNITDPRINLAIEEYCVKHLDPEQTYLLFYVNQPSIIIGKNQNT 50
BSNT_01741___ 51 IEEINTKYVEENGIIVVRRLSGGGAVYHDLGNLNFSFITKDDGDSFHNFK 100
||||||||||:|||||||||||||||||||||||||||||||||||||||
RBAM_010450__ 51 IEEINTKYVEDNGIIVVRRLSGGGAVYHDLGNLNFSFITKDDGDSFHNFK 100
BSNT_01741___ 101 KFTEPVIQALHQLGVEAELSGRNDIVVDGRKISGNAQFATKGRIFSHGTL 150
||||||||||.|||||||||||||||.|||||||||||:|||||||||||
RBAM_010450__ 101 KFTEPVIQALRQLGVEAELSGRNDIVADGRKISGNAQFSTKGRIFSHGTL 150
BSNT_01741___ 151 MFDSAIDHVVSALKVKKDKIESKGIKSIRSRVANISEFLDDKMTTEEFRS 200
|.||||||||||||||||||||||||||||||||||||||||||.:||:.
RBAM_010450__ 151 MLDSAIDHVVSALKVKKDKIESKGIKSIRSRVANISEFLDDKMTADEFKK 200
BSNT_01741___ 201 HLLRHIFNTNDIGNVPEYKLTEKDWETIHQISKERYQNWDWNYGRSPKFN 250
|||.|||||||:..|||||||::||:.|.:||:|||||||||:||||.||
RBAM_010450__ 201 HLLHHIFNTNDLSEVPEYKLTDEDWKAIRKISEERYQNWDWNFGRSPAFN 250
BSNT_01741___ 251 LNHSKRYPVGSIDLRLEVKKGKIEDCKIFGDFFGVGDVSEIENLLVGKQY 300
|.|||||||||||||||||||.|:||||||||||..|||.:|..|.||||
RBAM_010450__ 251 LQHSKRYPVGSIDLRLEVKKGIIQDCKIFGDFFGAKDVSGVEQALTGKQY 300
BSNT_01741___ 301 ERSVIADVLEGVNLKHYFGNITKEDFLDLIY 331
:|:.|.:.|.|::||.|||.|..||||:|||
RBAM_010450__ 301 DRTAIKEALAGIDLKQYFGKIELEDFLELIY 331
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.