Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01741 and RBAM_010450

See DNA alignment / Visit BSNT_01741 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:26
# Commandline: needle
#    -asequence pep-align/BSNT_01741___yhfJ.1.9828.seq
#    -bsequence pep-align/RBAM_010450___yhfJ.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01741___yhfJ-RBAM_010450___yhfJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01741___yhfJ-RBAM_010450___yhfJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01741___yhfJ
# 2: RBAM_010450___yhfJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 331
# Identity:     283/331 (85.5%)
# Similarity:   302/331 (91.2%)
# Gaps:           0/331 ( 0.0%)
# Score: 1503.0
# 
#
#=======================================

BSNT_01741___      1 MLFIDNQNINDPRINLAIEEYCVKHLDPEQQYLLFYVNQPSIIIGKNQNT     50
                     |||||||||.||||||||||||||||||||.|||||||||||||||||||
RBAM_010450__      1 MLFIDNQNITDPRINLAIEEYCVKHLDPEQTYLLFYVNQPSIIIGKNQNT     50

BSNT_01741___     51 IEEINTKYVEENGIIVVRRLSGGGAVYHDLGNLNFSFITKDDGDSFHNFK    100
                     ||||||||||:|||||||||||||||||||||||||||||||||||||||
RBAM_010450__     51 IEEINTKYVEDNGIIVVRRLSGGGAVYHDLGNLNFSFITKDDGDSFHNFK    100

BSNT_01741___    101 KFTEPVIQALHQLGVEAELSGRNDIVVDGRKISGNAQFATKGRIFSHGTL    150
                     ||||||||||.|||||||||||||||.|||||||||||:|||||||||||
RBAM_010450__    101 KFTEPVIQALRQLGVEAELSGRNDIVADGRKISGNAQFSTKGRIFSHGTL    150

BSNT_01741___    151 MFDSAIDHVVSALKVKKDKIESKGIKSIRSRVANISEFLDDKMTTEEFRS    200
                     |.||||||||||||||||||||||||||||||||||||||||||.:||:.
RBAM_010450__    151 MLDSAIDHVVSALKVKKDKIESKGIKSIRSRVANISEFLDDKMTADEFKK    200

BSNT_01741___    201 HLLRHIFNTNDIGNVPEYKLTEKDWETIHQISKERYQNWDWNYGRSPKFN    250
                     |||.|||||||:..|||||||::||:.|.:||:|||||||||:||||.||
RBAM_010450__    201 HLLHHIFNTNDLSEVPEYKLTDEDWKAIRKISEERYQNWDWNFGRSPAFN    250

BSNT_01741___    251 LNHSKRYPVGSIDLRLEVKKGKIEDCKIFGDFFGVGDVSEIENLLVGKQY    300
                     |.|||||||||||||||||||.|:||||||||||..|||.:|..|.||||
RBAM_010450__    251 LQHSKRYPVGSIDLRLEVKKGIIQDCKIFGDFFGAKDVSGVEQALTGKQY    300

BSNT_01741___    301 ERSVIADVLEGVNLKHYFGNITKEDFLDLIY    331
                     :|:.|.:.|.|::||.|||.|..||||:|||
RBAM_010450__    301 DRTAIKEALAGIDLKQYFGKIELEDFLELIY    331


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