Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01741 and RBAM_010450
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:26
# Commandline: needle
# -asequence dna-align/BSNT_01741___yhfJ.1.9828.seq
# -bsequence dna-align/RBAM_010450___yhfJ.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01741___yhfJ-RBAM_010450___yhfJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01741___yhfJ-RBAM_010450___yhfJ.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01741___yhfJ
# 2: RBAM_010450___yhfJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1009
# Identity: 778/1009 (77.1%)
# Similarity: 778/1009 (77.1%)
# Gaps: 26/1009 ( 2.6%)
# Score: 2981.0
#
#
#=======================================
BSNT_01741___ 1 ATGTTATTTATAGACAATCAAAATATCAATGATCCGCGGATCAATCTTGC 50
|||||||||||.|||||.|||||.||.|..||.|||.|||||||.||.||
RBAM_010450__ 1 ATGTTATTTATCGACAACCAAAACATAACCGACCCGAGGATCAACCTCGC 50
BSNT_01741___ 51 TATCGAGGAGTACTGTGTAAAGCATTTAGACCCTGAACAGCAATATTTGC 100
.||||||||.||.||.||.||||||.|.||||||||||||..|||..|||
RBAM_010450__ 51 GATCGAGGAATATTGCGTGAAGCATCTCGACCCTGAACAGACATACCTGC 100
BSNT_01741___ 101 TCTTTTATGTGAATCAACCGTCTATTATCATTGGAAAAAACCAAAATACA 150
|.||||||||.|||||.|||||.|||||||||||.||.||||||||.|||
RBAM_010450__ 101 TGTTTTATGTCAATCAGCCGTCGATTATCATTGGGAAGAACCAAAACACA 150
BSNT_01741___ 151 ATAGAAGAAATCAATACAAAATATGTTGAGGAAAACGGGATTATCGTCGT 200
|||||||||||||||||.|||||.||.||.||.|||||.||.||||||||
RBAM_010450__ 151 ATAGAAGAAATCAATACGAAATACGTAGAAGATAACGGAATCATCGTCGT 200
BSNT_01741___ 201 CCGCCGTTTATCAGGCGGGGGAGCTGTGTACCATGATCTGGGGAACTTGA 250
||||.|..|.|||||.||.||.||.||.||||||||.||.|||||..|||
RBAM_010450__ 201 CCGCAGGCTGTCAGGAGGCGGTGCGGTTTACCATGACCTCGGGAATCTGA 250
BSNT_01741___ 251 ACTTCAGCTTTATTACCAAGGATGACGGGGACAGCTTTCATAACTTTAAA 300
|.|||||.|||||.||.|||||||||||.|||||||||||.||.||||||
RBAM_010450__ 251 ATTTCAGTTTTATCACGAAGGATGACGGCGACAGCTTTCACAATTTTAAA 300
BSNT_01741___ 301 AAATTCACTGAGCCGGTGATTCAGGCGTTACATCAGCTTGGAGTTGAAGC 350
||||||||.||.||.||.|||||||||.|.|..|||||.||.||.|||||
RBAM_010450__ 301 AAATTCACCGAACCCGTTATTCAGGCGCTGCGCCAGCTCGGTGTGGAAGC 350
BSNT_01741___ 351 CGAATTAAGCGGCCGGAACGACATTGTAGTGGATGGCCGGAAAATATCCG 400
.||||||||||||||.||||||||.||.|.|||.|||.|.|||||.||||
RBAM_010450__ 351 TGAATTAAGCGGCCGAAACGACATCGTCGCGGACGGCAGAAAAATTTCCG 400
BSNT_01741___ 401 GAAACGCTCAGTTTGCAACGAAAGGCCGTATTTTCAGCCACGGCACCCTC 450
|.||||||||.|||.|.||||||||.|||||||||||||||||.||..|.
RBAM_010450__ 401 GCAACGCTCAATTTTCGACGAAAGGGCGTATTTTCAGCCACGGAACATTA 450
BSNT_01741___ 451 ATGTTTGATTCAGCCATTGATCATGTTGTATCAGCATTAAAGGTGAAAAA 500
|||.|.|||||.|||||||||||||||||.|||||.||.||.||||||||
RBAM_010450__ 451 ATGCTGGATTCCGCCATTGATCATGTTGTGTCAGCCTTGAAAGTGAAAAA 500
BSNT_01741___ 501 GGATAAAATTGAATCAAAAGGCATCAAATCGATCAGAAGCCGAGTGGCAA 550
.||.|||||.||||||||||||||.||.||||||||||||||.||.||.|
RBAM_010450__ 501 AGACAAAATCGAATCAAAAGGCATTAAGTCGATCAGAAGCCGTGTCGCCA 550
BSNT_01741___ 551 ACATCAGTGAGTTTCTCGATGATAAAATGACCACCGAAGAATTC----CG 596
|||||||.||||||||.|||||.||||||||..|.||.|||||| .|
RBAM_010450__ 551 ACATCAGCGAGTTTCTTGATGACAAAATGACGGCGGATGAATTCAAAAAG 600
BSNT_01741___ 597 CAGCCATTTGCTTCGCCATATTTTTAACACGAACGACATT--GGAAACGT 644
||.| ||||||.||||||||||||.||.||.||..|| .||| ||
RBAM_010450__ 601 CACC----TGCTTCACCATATTTTTAATACAAATGATCTTTCCGAA--GT 644
BSNT_01741___ 645 GCCGGAGTATAAGCTGACGGAAAAAGATTGGGAGACCATTCATCAAATTT 694
||||||.|||||.|||||.||..||||.|||.|..|.||.|...|.||||
RBAM_010450__ 645 GCCGGAATATAAACTGACCGATGAAGACTGGAAAGCGATCCGGAAGATTT 694
BSNT_01741___ 695 CGAAAGAGCGCTATCAGAATTGGGATTGGAACTACGGCCGCTCACCGAAA 744
|..|||||||||||||.||.|||||.|||||.|.|||..|.||.||...|
RBAM_010450__ 695 CCGAAGAGCGCTATCAAAACTGGGACTGGAATTTCGGAAGGTCGCCCGCA 744
BSNT_01741___ 745 TTTAACCTTAATCATTCGAAACGTTATCCGGTTGGATCGATCGATTTGCG 794
|||||.|||.|.||||||||||||||||||||.||||||||.|||.||||
RBAM_010450__ 745 TTTAATCTTCAGCATTCGAAACGTTATCCGGTCGGATCGATTGATCTGCG 794
BSNT_01741___ 795 CCTAGAGGTCAAGAAAGGCAAAATCGAGGACTGCAAAATCTTCGGAGATT 844
.||.||.||.||.|||||.|..||..|||||||||||||.|||||.||||
RBAM_010450__ 795 TCTTGAAGTGAAAAAAGGAATCATTCAGGACTGCAAAATTTTCGGTGATT 844
BSNT_01741___ 845 TCTTCGGTGTCG-GTGATGTATCTGAAATTGAAAACCTGCTGGTCGGAAA 893
||||||||| || ..|||||...||.|.|.|||.|...||||..||||||
RBAM_010450__ 845 TCTTCGGTG-CGAAAGATGTGAGTGGAGTCGAACAGGCGCTGACCGGAAA 893
BSNT_01741___ 894 ACAATACGAACGCAGCGTCATCGCTGATGTGCTCGAAGGTGTGAATCTCA 943
|||.||.||.||.|.||..|||...||.|.|||.|..||..|..||||.|
RBAM_010450__ 894 ACAGTATGACCGAACCGCTATCAAGGAGGCGCTGGCCGGAATCGATCTGA 943
BSNT_01741___ 944 AGCATTACTTTGGGAACATTACGAAAGAG------GATTTCCTTGATCTG 987
|.||.||.||.||.||.|| |||| ||||||||.||.|||
RBAM_010450__ 944 AACAGTATTTCGGCAAAAT------AGAGCTGGAAGATTTCCTCGAGCTG 987
BSNT_01741___ 988 ATTTATTAA 996
||||||||.
RBAM_010450__ 988 ATTTATTAG 996
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