Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01740 and RBAM_010440

See DNA alignment / Visit BSNT_01740 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:26
# Commandline: needle
#    -asequence pep-align/BSNT_01740___yhfI.1.9828.seq
#    -bsequence pep-align/RBAM_010440___yhfI.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01740___yhfI-RBAM_010440___yhfI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01740___yhfI-RBAM_010440___yhfI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01740___yhfI
# 2: RBAM_010440___yhfI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 244
# Identity:     209/244 (85.7%)
# Similarity:   227/244 (93.0%)
# Gaps:           0/244 ( 0.0%)
# Score: 1128.0
# 
#
#=======================================

BSNT_01740___      1 MKVTVIGCYGGFPAANEATSGYLFQSGDYSLLVDCGSAVLSKLFGYVPAE     50
                     ||||||||.||||||||||||||||||.||||||||||||||||.|||||
RBAM_010440__      1 MKVTVIGCCGGFPAANEATSGYLFQSGGYSLLVDCGSAVLSKLFAYVPAE     50

BSNT_01740___     51 KLDAVVLSHYHHDHIADIGPLQFAKQVGSFLGKGEHTLPIYGHDADIEQF    100
                     :||||:||||||||||||||||||||||||||||.|.|||||||||||||
RBAM_010440__     51 ELDAVILSHYHHDHIADIGPLQFAKQVGSFLGKGTHALPIYGHDADIEQF    100

BSNT_01740___    101 QKLTYKTHTKGIAYQPDQPLTAGPFTITFLKTIHPVTCYAMRITDGSHTV    150
                     ::|||||||||:|||||:||:.||||||||||:||||||||||||||.:|
RBAM_010440__    101 ERLTYKTHTKGVAYQPDRPLSLGPFTITFLKTVHPVTCYAMRITDGSASV    150

BSNT_01740___    151 VYTADSSYQDSFIPFSKDADLLISECNFYADQDGTSAGHMNSLEAGRIAK    200
                     ||||||||||:||||:::|||||.||||||||||||||||||||||||||
RBAM_010440__    151 VYTADSSYQDAFIPFAENADLLICECNFYADQDGTSAGHMNSLEAGRIAK    200

BSNT_01740___    201 EAGAGELLLTHLPHFGVHDNLRKEAKTVFNGEVYIAKSGFVWEG    244
                     |||||||:||||||||.|..|::||::||.|||.||.||..||.
RBAM_010440__    201 EAGAGELILTHLPHFGEHRKLKEEAESVFGGEVTIAASGLKWEK    244


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