Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01740 and RBAM_010440
See
Amino acid alignment /
Visit
BSNT_01740 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:26
# Commandline: needle
# -asequence dna-align/BSNT_01740___yhfI.1.9828.seq
# -bsequence dna-align/RBAM_010440___yhfI.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01740___yhfI-RBAM_010440___yhfI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01740___yhfI-RBAM_010440___yhfI.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01740___yhfI
# 2: RBAM_010440___yhfI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 751
# Identity: 582/751 (77.5%)
# Similarity: 582/751 (77.5%)
# Gaps: 32/751 ( 4.3%)
# Score: 2241.5
#
#
#=======================================
BSNT_01740___ 1 ATGAAAGTTACAGTTATCGGATGCTATGGCGGTTTTCCGGCCGCAAATGA 50
|||||||||||||||||.||.||||..|||||.||||||||||||||.||
RBAM_010440__ 1 ATGAAAGTTACAGTTATTGGGTGCTGCGGCGGGTTTCCGGCCGCAAACGA 50
BSNT_01740___ 51 AGCGACGTCAGGCTATTTGTTTCAGTCAGGTGATTACTCTCTGCTTGTTG 100
|||.||.|||||||||.||||||||||.||.|.|||.||||||||.||.|
RBAM_010440__ 51 AGCAACTTCAGGCTATCTGTTTCAGTCCGGCGGTTATTCTCTGCTCGTCG 100
BSNT_01740___ 101 ATTGCGGCAGTGCCGTTTTGTCTAAGCTGTTCGGATATGTGCCGGCGGAA 150
|||||||.||.|||||.||.||.||||||||.|..|||||.|||||.|||
RBAM_010440__ 101 ATTGCGGAAGCGCCGTATTATCAAAGCTGTTTGCCTATGTTCCGGCAGAA 150
BSNT_01740___ 151 AAGCTGGATGCGGTCGTTCTGTCTCATTATCACCATGACCATATCGCTGA 200
.||||.|||||.|||.||.||||.||||||||||||||.|||||||||||
RBAM_010440__ 151 GAGCTTGATGCCGTCATTTTGTCCCATTATCACCATGATCATATCGCTGA 200
BSNT_01740___ 201 TATCGGGCCGCTGCAATTTGCCAAGCAAGTCGGTTCGTTTCTCGGCAAAG 250
||||||||||||.|||||||||||.||.|||||.||.||||||||.||||
RBAM_010440__ 201 TATCGGGCCGCTTCAATTTGCCAAACAGGTCGGCTCCTTTCTCGGAAAAG 250
BSNT_01740___ 251 GAGA-GCATACGCTTCCGATTTACGGACATGATGCTGATATAGAACAGTT 299
| || ||||.|.||.|||||||||||.|||||||||||||||||||||||
RBAM_010440__ 251 G-GACGCATGCACTGCCGATTTACGGGCATGATGCTGATATAGAACAGTT 299
BSNT_01740___ 300 TCAAAAGCTTACATATAAAACACATACGAAAGGGA-TCGCCTATCAGCCG 348
|.|....||||||||||||||.||||| ||||||| |.||||||||||||
RBAM_010440__ 300 TGAGCGCCTTACATATAAAACGCATAC-AAAGGGAGTGGCCTATCAGCCG 348
BSNT_01740___ 349 GATCAGCCGCTGACTGCCGGTCCGTTTACGATTACCTTTTTAAAAACGAT 398
||.|..|||||..||...||||||||.||.|||||||||.|.||||||.|
RBAM_010440__ 349 GACCGCCCGCTTTCTCTAGGTCCGTTCACCATTACCTTTCTGAAAACGGT 398
BSNT_01740___ 399 TCACCCGGTGACGTGCTATGCCATGCGGATTACTGACGG--CAG--TCAC 444
.||.|||||.||.||.|||||.||||||||||||||||| ||| |
RBAM_010440__ 399 GCATCCGGTCACTTGTTATGCGATGCGGATTACTGACGGTTCAGCTT--- 445
BSNT_01740___ 445 ACTGTTGTTTATACTGCTGATTCCAGCTATCAGGATTCATTTATACCGTT 494
|||||||.|||||.||||||||.|||||.|||||..|.|||||.|||||
RBAM_010440__ 446 -CTGTTGTGTATACGGCTGATTCAAGCTACCAGGACGCGTTTATCCCGTT 494
BSNT_01740___ 495 TTCGAAAGATGCTGATTTATTGATCTCAGAATGCAATTTTTATGCCGATC 544
|.||.||.||||.|||.|..||||||..||.|||||||||||.||.||.|
RBAM_010440__ 495 TGCGGAAAATGCCGATCTGCTGATCTGCGAGTGCAATTTTTACGCAGACC 544
BSNT_01740___ 545 AAGACGGAACAAGT--GCAGGCCATATGAACAGCCTGGAAGCCGGGCGCA 592
|.||||| ||.|| ||.||||||||||||||..||||||||||.||.|
RBAM_010440__ 545 AGGACGG--CACGTCAGCCGGCCATATGAACAGTTTGGAAGCCGGACGTA 592
BSNT_01740___ 593 TTGCAAAAGAAGCGGGAGCGGGAGAACTGCTGCTGACACATTTGCCGCAT 642
|.||.||.||.||.||||||||.||.|||.|.||.||.|||.||||.|||
RBAM_010440__ 593 TCGCGAAGGAGGCCGGAGCGGGGGAGCTGATTCTCACGCATCTGCCTCAT 642
BSNT_01740___ 643 TTTGGCGTGCA--------TGACAATCTTCGCAAAGAAGCGAAAACCGTT 684
||.||||.||| |||.| .||||||||.||.||||.
RBAM_010440__ 643 TTCGGCGAGCACCGGAAGCTGAAA--------GAAGAAGCGGAATCCGTG 684
BSNT_01740___ 685 TTTAACGGAGAAGTGTATATTGCGAAATCAGGTTTTGTGTGGGAAGGATA 734
||....||.||||||...||.||....||.||.||...||||||...|||
RBAM_010440__ 685 TTCGGGGGCGAAGTGACAATCGCCGCTTCCGGATTGAAGTGGGAGAAATA 734
BSNT_01740___ 735 A 735
|
RBAM_010440__ 735 A 735
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.