Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01731 and RBAM_010400

See DNA alignment / Visit BSNT_01731 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:26
# Commandline: needle
#    -asequence pep-align/BSNT_01731___fabHB.1.9828.seq
#    -bsequence pep-align/RBAM_010400___fabHB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01731___fabHB-RBAM_010400___fabHB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01731___fabHB-RBAM_010400___fabHB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01731___fabHB
# 2: RBAM_010400___fabHB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 325
# Identity:     262/325 (80.6%)
# Similarity:   287/325 (88.3%)
# Gaps:           0/325 ( 0.0%)
# Score: 1381.0
# 
#
#=======================================

BSNT_01731___      1 MSKAKITAIGTYAPSRRLTNADLEKIVDTSDEWIVQRTGMRERRIADEHQ     50
                     |||:||||||||||:|||||||||:|||||||||||||||:|||||.||:
RBAM_010400__      1 MSKSKITAIGTYAPARRLTNADLERIVDTSDEWIVQRTGMKERRIAGEHE     50

BSNT_01731___     51 FTSDLCIEAVKNLKSRYKGTLDDVDMILVATTTSDYAFPSTACRVQEYFG    100
                     ||||||:||||||..||.|||||||||||||||:||||||||.|||.|||
RBAM_010400__     51 FTSDLCVEAVKNLAERYSGTLDDVDMILVATTTADYAFPSTAARVQAYFG    100

BSNT_01731___    101 WESTGALDINATCAGLTYGLHLANGLITSGLHQKILVIAGETLSKVTDYT    150
                     |..|||||||||||||||||.||:.|||:|.|||::||||||||||||||
RBAM_010400__    101 WPHTGALDINATCAGLTYGLQLADALITAGSHQKVIVIAGETLSKVTDYT    150

BSNT_01731___    151 DRTTCVLFGDAAGALLVERDEETPGFLASVQGTSGNGGDILYRAGLRNEI    200
                     |||||||||||||||||||||..|||||:||||:|...|:|||.||..|:
RBAM_010400__    151 DRTTCVLFGDAAGALLVERDESAPGFLAAVQGTAGGSADVLYRTGLSAEL    200

BSNT_01731___    201 NGVQLVGSGKMVQNGREVYKWAARTVPGEFERLLHKAGLSSDDLDWFVPH    250
                     ||..|.|.|.|||||||||||||||||.|...||.|||.|.|||||||||
RBAM_010400__    201 NGEPLKGGGNMVQNGREVYKWAARTVPEECNALLEKAGFSKDDLDWFVPH    250

BSNT_01731___    251 SANLRMIESICEKTPFPIEKTLTSVEHYGNTSSVSIVLALDLAVKAGKLK    300
                     |||:|||||||||.|||:|:||||||:|||||||||:||||.||||.||.
RBAM_010400__    251 SANMRMIESICEKLPFPLERTLTSVEYYGNTSSVSIILALDEAVKAKKLS    300

BSNT_01731___    301 KDQIVLLFGFGGGLTYTGLLIKWGM    325
                     :.|.::||||||||||||||::||.
RBAM_010400__    301 EGQTLVLFGFGGGLTYTGLLVRWGF    325


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