Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01731 and RBAM_010400
See
Amino acid alignment /
Visit
BSNT_01731 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:26
# Commandline: needle
# -asequence dna-align/BSNT_01731___fabHB.1.9828.seq
# -bsequence dna-align/RBAM_010400___fabHB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01731___fabHB-RBAM_010400___fabHB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01731___fabHB-RBAM_010400___fabHB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01731___fabHB
# 2: RBAM_010400___fabHB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1017
# Identity: 741/1017 (72.9%)
# Similarity: 741/1017 (72.9%)
# Gaps: 78/1017 ( 7.7%)
# Score: 2589.0
#
#
#=======================================
BSNT_01731___ 1 ATGTCAAAAGCAAAAATTACAGCTATCGGCACCTATGCGCCGAGCA-GAC 49
|||||||||.|.|||||||||||.|||||.||.|||||.||| ||| |.|
RBAM_010400__ 1 ATGTCAAAATCTAAAATTACAGCAATCGGTACATATGCTCCG-GCACGCC 49
BSNT_01731___ 50 GTTTAACCAATGCAGATTTAGAAAAGATCGTTGATACCTCTGATGAATGG 99
|.|||||.||.||.|||||.||....|||||.|||||.||||||||||||
RBAM_010400__ 50 GATTAACAAACGCGGATTTGGAGCGCATCGTCGATACATCTGATGAATGG 99
BSNT_01731___ 100 ATCGTTCAGCGCACAGGAATGAGAGAACGCCGGATTGCGGATGAACATCA 149
|||||.||||||||.||.||||..|||.|.||.|||||.|..||||||.|
RBAM_010400__ 100 ATCGTCCAGCGCACCGGTATGAAGGAAAGACGCATTGCCGGCGAACATGA 149
BSNT_01731___ 150 ATTTACCTCTGATTTATGCATAGAAGCGGTGAAGAATCT--CAAGAGCCG 197
|||.||.||.|||||.||..|.|||||||||||.||.|| ||..| ||
RBAM_010400__ 150 ATTCACATCGGATTTGTGTGTGGAAGCGGTGAAAAACCTTGCAGAA--CG 197
BSNT_01731___ 198 TTATAAAGGAACACTTGATGATGTCGATATGATCCTCGTTGCCACAACCA 247
.||.|..|||||.|||||||||||||||||||||||.||.||||||||.|
RBAM_010400__ 198 ATACAGCGGAACTCTTGATGATGTCGATATGATCCTTGTCGCCACAACGA 247
BSNT_01731___ 248 CATCCGATTACGCCTTTCCGAGTA---CGGCATGCCGCGTACAGGAATAT 294
|..|.||.||.||.|||||.||.| ||||| |||||.||||..||.
RBAM_010400__ 248 CGGCGGACTATGCGTTTCCAAGCACCGCGGCA---CGCGTGCAGGCTTAC 294
BSNT_01731___ 295 TTCGGCTGG--GAAAGCACCGGCGCGCTGGATATTAATGCGACATGCGCC 342
||||||||| |.| |||.||.|||||.||||||||.||.|||||||||
RBAM_010400__ 295 TTCGGCTGGCCGCA--CACGGGGGCGCTTGATATTAACGCCACATGCGCC 342
BSNT_01731___ 343 GGGCTGACTTACGGCCTCCATTTGGCAAATGGATTGATCACATCAGGCCT 392
||.||.|||||||||||.||..|.|||.|.|.|||.||.||..|.|| |
RBAM_010400__ 343 GGACTCACTTACGGCCTTCAGCTCGCAGACGCATTAATTACCGCCGG--T 390
BSNT_01731___ 393 T--CATCAAAAAATTCTCGTCATCGCCGGAGAGACGTTATCAAAGGTAAC 440
| |||||||||.|..|.|||||.|||||.||.||.||||||||||||||
RBAM_010400__ 391 TCCCATCAAAAAGTGATTGTCATTGCCGGTGAAACATTATCAAAGGTAAC 440
BSNT_01731___ 441 GGATTATACCGATCGAACGACATGCGTACTGTTCGGCGATGCCGCGGGTG 490
|||||||||.||.||.|||||.|||||.||.|||||.||.||.||.||.|
RBAM_010400__ 441 GGATTATACTGACCGGACGACCTGCGTTCTTTTCGGAGACGCTGCTGGCG 490
BSNT_01731___ 491 CGCTGTTAGTAGAACGAGATGAA-GAGACGCCGGGATTTCTTGCGTCTGT 539
|.||.||.||||||||.||.||| .|| |||||||.|||.|.||..|.||
RBAM_010400__ 491 CCCTATTGGTAGAACGCGACGAATCAG-CGCCGGGCTTTTTGGCAGCCGT 539
BSNT_01731___ 540 ACAAGGAACAAGCGGGAACGGCGGC---GATATTTTGTATCGTGCCGGAC 586
.|||||||| ||||||| |||.|| ||..|..|||||||..|.||||
RBAM_010400__ 540 GCAAGGAAC-AGCGGGA--GGCAGCGCGGACGTGCTGTATCGCACGGGAC 586
BSNT_01731___ 587 T--GCGAAATGAAATAAACGGTGTGCAGCTT---GTCGGTTCCGGAAAAA 631
| |||.| |||.|||||||.|.||.|||| |.||| .|||||.|
RBAM_010400__ 587 TGAGCGCA--GAATTAAACGGCGAGCCGCTTAAAGGCGG---AGGAAACA 631
BSNT_01731___ 632 TGGTGCAAAACGGACGCGAGGTATATAAATGGGCCGCAAGAACCGTCCCT 681
|||||||||||||.|||||.||||||||||||||.||.||||||||.|||
RBAM_010400__ 632 TGGTGCAAAACGGGCGCGAAGTATATAAATGGGCGGCCAGAACCGTGCCT 681
BSNT_01731___ 682 GGCGAATTTGAACGG--CTTTTACATAAAGCAGGACTCAGCTCT------ 723
|..||| ||.|..| ||||||.|.||||| |.|||.|
RBAM_010400__ 682 GAGGAA--TGCAATGCCCTTTTAGAAAAAGC------CGGCTTTTCAAAA 723
BSNT_01731___ 724 GATGATCTCGATTGGTTTGTTCCTCACAGCGCCAACTTGCGCATGATCGA 773
||.|||||.||||||||.||||||||||||||||||.||||.||||||||
RBAM_010400__ 724 GACGATCTGGATTGGTTCGTTCCTCACAGCGCCAACATGCGGATGATCGA 773
BSNT_01731___ 774 GTCAATTTGTGAAAAAACACCGTTCCCGATTGAAAAAACGCTCACTAGTG 823
.||.||.||.||||||...||.|||||..|||||...||..|.||.||.|
RBAM_010400__ 774 ATCCATCTGCGAAAAACTGCCCTTCCCACTTGAACGGACATTGACAAGCG 823
BSNT_01731___ 824 TTGAACACTATGGAAACACGTCTTCGGTTTCAATTGTTTTGGCGCTCGAT 873
|||||.|.||.||.|||||.||.||||||||.|||.||.|.||..|.|||
RBAM_010400__ 824 TTGAATATTACGGCAACACTTCATCGGTTTCTATTATTCTCGCATTGGAT 873
BSNT_01731___ 874 CTCGCAGTGAAAGCCGGGAAGCTGAAAA--------AAGATCAAA---TC 912
...||.|||||||| || |||| |||..||.| |.
RBAM_010400__ 874 GAAGCTGTGAAAGC----AA----AAAAACTGTCGGAAGGCCAGACGCTG 915
BSNT_01731___ 913 GTTTTGCTTTTCGGGTTTGGCGGCGGATTAACCTATACAGGATTGCTTAT 962
||.| |.||||||||.|||||||||||.||.|||||.|||.|| ||..
RBAM_010400__ 916 GTAT---TATTCGGGTTCGGCGGCGGATTGACGTATACCGGACTG-TTGG 961
BSNT_01731___ 963 TAA-ATGGGGAATGTAA 978
||| |||||||.|.|||
RBAM_010400__ 962 TAAGATGGGGATTTTAA 978
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.