Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01730 and RBAM_010390

See DNA alignment / Visit BSNT_01730 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:25
# Commandline: needle
#    -asequence pep-align/BSNT_01730___yhgE.1.9828.seq
#    -bsequence pep-align/RBAM_010390___yhgE.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01730___yhgE-RBAM_010390___yhgE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01730___yhgE-RBAM_010390___yhgE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01730___yhgE
# 2: RBAM_010390___yhgE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 777
# Identity:     580/777 (74.6%)
# Similarity:   671/777 (86.4%)
# Gaps:           2/777 ( 0.3%)
# Score: 2968.5
# 
#
#=======================================

BSNT_01730___      1 MNTIRSQWKDIVTSKKLLIPIIAILFVPLIYSGVFLKAYWDPYGTVDQLP     50
                     ||||:||||||||:||||||||||||||||||||||||||||||||||||
RBAM_010390__      1 MNTIKSQWKDIVTNKKLLIPIIAILFVPLIYSGVFLKAYWDPYGTVDQLP     50

BSNT_01730___     51 VVVVNQDKGATYEGEKLQIGDDLVKELKDNNNFDWHFSNDLDQSLKDLLN    100
                     ||||||||||.|||:.||||||||||||.|:|||||||:|||||||||||
RBAM_010390__     51 VVVVNQDKGADYEGKHLQIGDDLVKELKKNDNFDWHFSSDLDQSLKDLLN    100

BSNT_01730___    101 QKYYLVVEIPEDFSKNASTVLDKNPKKLDLKYHTNAGSNYVGATIGEKAI    150
                     .||||:||||||||.|||||:|||||||||||||||||||||||||||||
RBAM_010390__    101 AKYYLLVEIPEDFSNNASTVMDKNPKKLDLKYHTNAGSNYVGATIGEKAI    150

BSNT_01730___    151 DKLKASVSKEVTEQYTKVIFDNFKDIAKGLSDASSGAKKIDDGTKDAKNG    200
                     |||||||||||||||.||||||||||||||..|||||||||||||:||:|
RBAM_010390__    151 DKLKASVSKEVTEQYAKVIFDNFKDIAKGLGKASSGAKKIDDGTKNAKDG    200

BSNT_01730___    201 SAQLKENLAKLKESTATISDKTAQLADGAAQVTSGIQSLDSSLGKFQDSS    250
                     ||:||||||||.||||||.|||.|||||||:||||||:||||:.|.|.:|
RBAM_010390__    201 SAKLKENLAKLTESTATIGDKTQQLADGAAKVTSGIQTLDSSIAKLQSAS    250

BSNT_01730___    251 NQIYDKSSQLAAGSGKITGKLNELNAGLQKVQQGLPNLTNGLDQLNSKAQ    300
                     .:|.|||.|:|:|.|::...|.......:::||.||:|||||..||||||
RBAM_010390__    251 AEIQDKSGQIASGGGQVASGLKTSLDAQKQLQQKLPDLTNGLSALNSKAQ    300

BSNT_01730___    301 EGSEKAAKAEKLINALDLTKLETAVNNLEKSETAMKEFKKQLSDFENSLK    350
                     |.|:|||..|..||:::|:.:|.||..||::|..:::|||:|||.:|||.
RBAM_010390__    301 EVSQKAAAFEDAINSVNLSDIENAVGQLEQTEKDLQQFKKKLSDLKNSLD    350

BSNT_01730___    351 NRDQAFKNLINSSDFLTAEQKSQLISSVEKQLPKVDAPDFDEILSGLPSA    400
                     .||.|.|.:|..|||||.|||::|:..:.::|||.|.||.|.|:|.|||.
RBAM_010390__    351 ARDDAVKKVIKDSDFLTDEQKAKLVQLLNEKLPKADLPDLDNIVSQLPSG    400

BSNT_01730___    401 D--QLPDIATIKSSLEDVKAQVAQVKALPEATSKLYNGAKATQDAIDKLT    448
                     .  ||||::.|||:|:||||:..|:||||::||||||||.|.||||::||
RBAM_010390__    401 GDIQLPDMSVIKSALKDVKAKADQLKALPQSTSKLYNGAAAVQDAINQLT    450

BSNT_01730___    449 AGSEKLYNASQQVTDGQTKLTAGIGEYNKQFAKAKAGSEQLVTGSSQVSG    498
                     ||::|||:.:|.|.:.|.||||||||||.:|.:.|:|||.||:||.||||
RBAM_010390__    451 AGTDKLYSGAQTVFESQNKLTAGIGEYNSKFGQLKSGSEALVSGSGQVSG    500

BSNT_01730___    499 GLFKLLDGSKQVQSGSSKLADGSASLDTGLGKLLDGTGELSSKLKDAADQ    548
                     ||.||||...::..||||:..|.|||.|||.|||||||:|||:|||||||
RBAM_010390__    501 GLTKLLDAQNKIHDGSSKIEQGQASLGTGLSKLLDGTGQLSSQLKDAADQ    550

BSNT_01730___    549 TGDIDADDQTYGMFADPVKTKDDAIHSVPNYGTGLTPYILSMGLYVGGIM    598
                     ||||..||:||.||||||||.|:|||||||||||||||||||||||||:|
RBAM_010390__    551 TGDIKTDDKTYSMFADPVKTDDNAIHSVPNYGTGLTPYILSMGLYVGGLM    600

BSNT_01730___    599 LTVVFPLKEASGRPRNGFEWFFSKFNVMMLVGIIQSLIVATVLLLGIGLE    648
                     |||||||.|||||||||||||.|||:|::|||:|||:|||||||.||||:
RBAM_010390__    601 LTVVFPLSEASGRPRNGFEWFLSKFSVILLVGLIQSVIVATVLLKGIGLD    650

BSNT_01730___    649 VESTWRFYVFTIITSLAFLAMIQFLATTMGNPGRFIAVIILVLQLGASGG    698
                     ||||||||:||:|||:|||:|||.||||||||||||||||||||||||||
RBAM_010390__    651 VESTWRFYLFTMITSIAFLSMIQLLATTMGNPGRFIAVIILVLQLGASGG    700

BSNT_01730___    699 TFPLELLPNFYQVIHGALPMTYSINGFRAVISNGDFGYMWQMAGVLIGIA    748
                     ||||||||.||||||||||||||||||||||||||:|||||.|.:|:|||
RBAM_010390__    701 TFPLELLPGFYQVIHGALPMTYSINGFRAVISNGDYGYMWQQASILLGIA    750

BSNT_01730___    749 LVMIALSITYFTMLSRKEETSEEQRAS    775
                     :|||||:|.|||:.|:||..:||:..:
RBAM_010390__    751 VVMIALTIVYFTVQSKKEHKTEEEITA    777


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_01730 and RBAM_010390

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
