Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01729 and RBAM_010380
See
DNA alignment /
Visit
BSNT_01729 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:25
# Commandline: needle
# -asequence pep-align/BSNT_01729___yhgD.1.9828.seq
# -bsequence pep-align/RBAM_010380___yhgD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01729___yhgD-RBAM_010380___yhgD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01729___yhgD-RBAM_010380___yhgD.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01729___yhgD
# 2: RBAM_010380___yhgD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 191
# Identity: 164/191 (85.9%)
# Similarity: 178/191 (93.2%)
# Gaps: 1/191 ( 0.5%)
# Score: 840.0
#
#
#=======================================
BSNT_01729___ 1 MSIDRKKLILEAATKSFTQFGYKATTMDLVAKLANVGKGTIYTFFKNKEE 50
||:|||||||||||||||||||||||||||||||||||||||||||||||
RBAM_010380__ 1 MSVDRKKLILEAATKSFTQFGYKATTMDLVAKLANVGKGTIYTFFKNKEE 50
BSNT_01729___ 51 LFDEIFTTLLKEMKQKADEAMEPNLPFHENVHRALFAILEFRKTHQLTIK 100
|||:||||:|:|||:.|||||:|.|.|||||||||.||||||||||||||
RBAM_010380__ 51 LFDDIFTTILREMKEHADEAMKPELSFHENVHRALVAILEFRKTHQLTIK 100
BSNT_01729___ 101 IFQENAEIGTMAVQEVIQKMERAILSYIKSKIEDGIKSGAIKPCDPELTA 150
||||||||||:|||:||.|||||||||||.|||..|::|:||||||||||
RBAM_010380__ 101 IFQENAEIGTIAVQDVIAKMERAILSYIKEKIETAIENGSIKPCDPELTA 150
BSNT_01729___ 151 FVMLKLYIALIFDWEKQHPPLDKETIAGLLELYVVKGLSAN 191
||||||||||||||||.||||:|||||.|||:||.:|||.
RBAM_010380__ 151 FVMLKLYIALIFDWEKNHPPLEKETIAELLEMYVGQGLSK- 190
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.