Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01728 and RBAM_010370

See DNA alignment / Visit BSNT_01728 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:25
# Commandline: needle
#    -asequence pep-align/BSNT_01728___hemY.1.9828.seq
#    -bsequence pep-align/RBAM_010370___hemY.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01728___hemY-RBAM_010370___hemY.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01728___hemY-RBAM_010370___hemY.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01728___hemY
# 2: RBAM_010370___hemY
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 477
# Identity:     407/477 (85.3%)
# Similarity:   435/477 (91.2%)
# Gaps:           7/477 ( 1.5%)
# Score: 2106.0
# 
#
#=======================================

BSNT_01728___      1 MSDGKKHVVIIGGGITGLAAAFYMEKEIKEKNLPLEMTLVEASPRVGGKI     50
                     ||..|||:|||||||||||||||||||||||.||||:||:||.||.||||
RBAM_010370__      1 MSGDKKHLVIIGGGITGLAAAFYMEKEIKEKQLPLEVTLIEAGPRAGGKI     50

BSNT_01728___     51 QTVKKDGYIIERGPDSFLERKKSAPQLVKDLGLEHLLVNNATGQSYVLVN    100
                     ||..||||||||||||||||||||||||||||||||||||||||||||||
RBAM_010370__     51 QTQHKDGYIIERGPDSFLERKKSAPQLVKDLGLEHLLVNNATGQSYVLVN    100

BSNT_01728___    101 RTLHPMPKGAVMGIPTKIAPFVSTGLFSLSGKARAAMDFILPASKTKDDQ    150
                     .||||||||||||||||||||:||||||:.||||||:||:|||||.|:||
RBAM_010370__    101 ETLHPMPKGAVMGIPTKIAPFISTGLFSVPGKARAALDFVLPASKPKEDQ    150

BSNT_01728___    151 SLGEFFRRRVGDEVVENLIEPLLSGIYAGDIDKLSLMSTFPQFYQTEQKH    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_010370__    151 SLGEFFRRRVGDEVVENLIEPLLSGIYAGDIDKLSLMSTFPQFYQTEQKH    200

BSNT_01728___    201 RSLILGMKKTRPQGSGQQLTAKKQGQFQTLSTGLQTLVEEIEKQLKLTKV    250
                     |||||||||:|||.|||||||||||||.||:|||||||||:||||.||||
RBAM_010370__    201 RSLILGMKKSRPQPSGQQLTAKKQGQFLTLTTGLQTLVEELEKQLTLTKV    250

BSNT_01728___    251 YKGTKVTKLSRGGSGYSLELDNGVTLDADSVIVTAPHKAAAGMLSELPAI    300
                     .||||||.:.|...|||:.||||..|.|:..||||||||||.|||:|||:
RBAM_010370__    251 MKGTKVTHIGREEKGYSVTLDNGKVLYAEGCIVTAPHKAAAKMLSDLPAV    300

BSNT_01728___    301 SHLKNMHSTSVANVALGFPEGSVEMEHEGTGFVISRNSDFAITACTWTNK    350
                     |.||:||||||||||||||||:|:||||||||||||||||:|||||||||
RBAM_010370__    301 SCLKDMHSTSVANVALGFPEGAVKMEHEGTGFVISRNSDFSITACTWTNK    350

BSNT_01728___    351 KWPHAAPEGKTLLRAYVGKAGDESIVDLSDNDIINIVLEDLKKVMNINGE    400
                     |||||||||||||||||||||||||||||||:||.||:|||||||.||||
RBAM_010370__    351 KWPHAAPEGKTLLRAYVGKAGDESIVDLSDNEIIKIVMEDLKKVMKINGE    400

BSNT_01728___    401 PEMTCVTRWHESMPQYHVGHKQRIKELREALASAYPGVYMTGASFEGVGI    450
                     |||||||||:|||||||||||:||||.|:||.::|||||.||||||||||
RBAM_010370__    401 PEMTCVTRWNESMPQYHVGHKERIKEFRDALKASYPGVYATGASFEGVGI    450

BSNT_01728___    451 PDCIDQGKAAVSDALTYLFS-------    470
                     |||||||||||.|:|.|||.       
RBAM_010370__    451 PDCIDQGKAAVYDSLAYLFETYQPPLS    477


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