Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01724 and RBAM_010340
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:25
# Commandline: needle
# -asequence pep-align/BSNT_01724___pbpF.1.9828.seq
# -bsequence pep-align/RBAM_010340___pbpF.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01724___pbpF-RBAM_010340___pbpF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01724___pbpF-RBAM_010340___pbpF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01724___pbpF
# 2: RBAM_010340___pbpF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 714
# Identity: 574/714 (80.4%)
# Similarity: 641/714 (89.8%)
# Gaps: 1/714 ( 0.1%)
# Score: 3048.0
#
#
#=======================================
BSNT_01724___ 1 MFKIKKKKLFIPIIILVLTAFLALIGYISIIFLGHYVIDEKKLILHASSK 50
|.| |||:.|||.:|...||||||||||.|||||||||||||||||||||
RBAM_010340__ 1 MLK-KKKRFFIPAVIAAATAFLALIGYIIIIFLGHYVIDEKKLILHASSK 49
BSNT_01724___ 51 IVDQNGDEVASLYTENREPVSINEIPKQVREAFIAVEDKRFYEHHGIDAK 100
||||||||:|||||||||||||.::|:.||:|||||||||||||||||.|
RBAM_010340__ 50 IVDQNGDEIASLYTENREPVSIQQVPEDVRDAFIAVEDKRFYEHHGIDVK 99
BSNT_01724___ 101 SVGRAVYRDILAGGKVEGGSTITQQLAKNIFLTHDKTFLRKTKEVIIAIN 150
||||||:||:||||||||||||||||||||||||||||||||||||||||
RBAM_010340__ 100 SVGRAVFRDVLAGGKVEGGSTITQQLAKNIFLTHDKTFLRKTKEVIIAIN 149
BSNT_01724___ 151 LERDYSKDKLLEMYLNQLYFGHGVYGIQAASHYYFNKEVKDLTVSEGAVL 200
||||||||||||||||||||||||||||||||||||||||||||:|||||
RBAM_010340__ 150 LERDYSKDKLLEMYLNQLYFGHGVYGIQAASHYYFNKEVKDLTVAEGAVL 199
BSNT_01724___ 201 AAIPKAPSTYSPILHPDKNKERRDTILGMMNDQGYISAKEAVTAQGRTLG 250
||||||||.||||.|||||||||||||.||||||||||||||.|||||||
RBAM_010340__ 200 AAIPKAPSLYSPIQHPDKNKERRDTILAMMNDQGYISAKEAVRAQGRTLG 249
BSNT_01724___ 251 LHVKKQSETPWFDSYIDLVIKEAEDKYSISGEQLLQGGYTIKVPLDSKLQ 300
|:|||.|||||||||||||||||||:||:||||||||||||:..||||||
RBAM_010340__ 250 LNVKKTSETPWFDSYIDLVIKEAEDRYSMSGEQLLQGGYTIRTSLDSKLQ 299
BSNT_01724___ 301 KTAYQVMKEGSYYPGTDQNAEGSAVFINNKTGGVEAAIGGRDYTSKGYNR 350
||||.:|||..|:|||||.||||||||:||||||.||:|||||.:|||||
RBAM_010340__ 300 KTAYTLMKESGYFPGTDQAAEGSAVFIDNKTGGVRAAVGGRDYVTKGYNR 349
BSNT_01724___ 351 VTAVRQPGSTFKPLAVYGPAMQEKKFKPYSLLKDELQSYGDYTPKNYDSR 400
|||.|||||||||:|||||||||.||||||||:|:|.||..|.|||||.:
RBAM_010340__ 350 VTAKRQPGSTFKPIAVYGPAMQEDKFKPYSLLQDKLTSYDGYEPKNYDGQ 399
BSNT_01724___ 401 YEGEVTMSDAITYSKNAPAVWTLNEIGVETGKSYLKANGIDIPDEGLALA 450
|:|||||.||||||.||||||||.:|||:||||||:.||::|.|.|||:|
RBAM_010340__ 400 YKGEVTMQDAITYSINAPAVWTLKQIGVDTGKSYLEKNGMNISDNGLAIA 449
BSNT_01724___ 451 LGGLEKGVSPLQLAGAFHTFAANGTYTEPFFISSIIDEDGETIADHKEEG 500
||||.:||:|||||||:|||||||.||:||||.:|.||||||::..|...
RBAM_010340__ 450 LGGLSEGVTPLQLAGAYHTFAANGMYTKPFFIENITDEDGETLSGPKNGK 499
BSNT_01724___ 501 KRVFSKQTSWNMTRMLQQVVKKGTATSGAYHGDLAGKTGSTSYTGVSGAT 550
.||||.||:||||||||||||:|||:.|:|.||||||||:|::.|:.|||
RBAM_010340__ 500 TRVFSGQTAWNMTRMLQQVVKEGTASQGSYQGDLAGKTGTTTFPGIPGAT 549
BSNT_01724___ 551 KDAWFAGYTPKITGAVWMGYDKTDQNHYLKAGSSYPTRLFKDILTQAGET 600
||||||||||.:||||||||||||:.||||.||.||.||||.|:|:|||.
RBAM_010340__ 550 KDAWFAGYTPGLTGAVWMGYDKTDKTHYLKGGSQYPVRLFKAIVTKAGEN 599
BSNT_01724___ 601 GHVFTKPKNIKDLESPIELKPVKTLTADYTFKAAGLFTIELKWDAQEDDR 650
|..|.||:|:|:|.|||||:.||:|:|.|||||.||.|::||||.|:|||
RBAM_010340__ 600 GRTFKKPENVKELGSPIELEAVKSLSARYTFKAMGLITVQLKWDIQKDDR 649
BSNT_01724___ 651 AVYRIYVNKDGEETLLDSVEGKGSYEIPYANLFSGASYKIVPYNTQTKRE 700
.|||||..|||::.|||||:||||::|||||||||||||:||||:||.:|
RBAM_010340__ 650 VVYRIYEKKDGKDKLLDSVKGKGSFDIPYANLFSGASYKVVPYNSQTDQE 699
BSNT_01724___ 701 GEGTDYVQPKLFSS 714
||||:|||||||||
RBAM_010340__ 700 GEGTEYVQPKLFSS 713
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