Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01718 and RBAM_010310

See DNA alignment / Visit BSNT_01718 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:24
# Commandline: needle
#    -asequence pep-align/BSNT_01718___yhaA.1.9828.seq
#    -bsequence pep-align/RBAM_010310___yhaA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01718___yhaA-RBAM_010310___yhaA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01718___yhaA-RBAM_010310___yhaA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01718___yhaA
# 2: RBAM_010310___yhaA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 396
# Identity:     305/396 (77.0%)
# Similarity:   345/396 (87.1%)
# Gaps:           1/396 ( 0.3%)
# Score: 1645.0
# 
#
#=======================================

BSNT_01718___      1 MSISTLQKEINKQLDSCFEEMVEIRRHIHMYPELSFQEEKTAAFIASYYE     50
                     |:::||||.:|.|||..:|||||||||:||.||.||:|:||.|||||:||
RBAM_010310__      1 MTLTTLQKSLNAQLDGLYEEMVEIRRHLHMNPEPSFKEKKTPAFIASFYE     50

BSNT_01718___     51 SLGVPIRTNVGGRGVLAYIEGSEPGPTVALRADFDALPIQDEKDVPYASK    100
                     .|||||||||||.||.||||||||||.||||||||||||||||||||||:
RBAM_010310__     51 KLGVPIRTNVGGNGVTAYIEGSEPGPVVALRADFDALPIQDEKDVPYASQ    100

BSNT_01718___    101 VPGVMHACGHDGHTAALLAVAKVLHQNRHELKGTFVMIHQHAEEYYPGGA    150
                     :|||||||||||||||||||.|||::||.:|||:||||||||||..||||
RBAM_010310__    101 IPGVMHACGHDGHTAALLAVGKVLYRNREKLKGSFVMIHQHAEELSPGGA    150

BSNT_01718___    151 KPMIDDGCLENADVIFGTHLWATEPLGTILCRPGAVMAAADRFTIKVFGK    200
                     |.||:|||||:.|.|||||||||||.||:||||||||||||.|||||.||
RBAM_010310__    151 KAMIEDGCLEHVDAIFGTHLWATEPAGTVLCRPGAVMAAADGFTIKVIGK    200

BSNT_01718___    201 GGHGAHPHDTKDAVLIGSQIVTSLQHIVSRKVNPIQSAVISTGSFIADNP    250
                     |||||.||||||||||||||||:|||||||:|||:|.||||.|||||:||
RBAM_010310__    201 GGHGAIPHDTKDAVLIGSQIVTALQHIVSRRVNPVQPAVISAGSFIAENP    250

BSNT_01718___    251 FNVIADQAVLIGTARSFDENVRDILEKEIEAVVKGICSMHGASYEYTYEQ    300
                     ||.||||||:.||.|||||:||.:||.|||||||||||||.|||||.:::
RBAM_010310__    251 FNAIADQAVISGTVRSFDESVRSLLEAEIEAVVKGICSMHSASYEYRFKR    300

BSNT_01718___    301 GYPAVVNHPAETSHLVSTAKNTEGVQQVIDGEPQMGGEDFSYYLQNVKGT    350
                     |||||||||.|.:|..:.|..|:||.:|::|||||.|||||||||:.||.
RBAM_010310__    301 GYPAVVNHPEEAAHAAAAAAETDGVTKVVEGEPQMAGEDFSYYLQHTKGA    350

BSNT_01718___    351 FFFTGAAPEQPDRVYSHHHPKFDINEKAMLTAAKVLAGAAITYHQL    396
                     |||||||.|..:.:|.|||||||.||||||||||||.|||::|.: 
RBAM_010310__    351 FFFTGAALENAETIYPHHHPKFDFNEKAMLTAAKVLIGAAVSYPR-    395


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