Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01716 and RBAM_010300

See DNA alignment / Visit BSNT_01716 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:24
# Commandline: needle
#    -asequence pep-align/BSNT_01716___ecsC.1.9828.seq
#    -bsequence pep-align/RBAM_010300___ecsC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01716___ecsC-RBAM_010300___ecsC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01716___ecsC-RBAM_010300___ecsC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01716___ecsC
# 2: RBAM_010300___ecsC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 236
# Identity:     172/236 (72.9%)
# Similarity:   206/236 (87.3%)
# Gaps:           2/236 ( 0.8%)
# Score: 903.5
# 
#
#=======================================

BSNT_01716___      1 MTDNQLLMQEALEWKMHFLRKDSMFERFSKRVQTKVNERIPEKIHTVVTE     50
                     |||:|.|:||||:||..|||||||.|||||.:|.|:|||||:|||.|:||
RBAM_010300__      1 MTDDQQLIQEALQWKARFLRKDSMLERFSKGMQAKINERIPDKIHAVITE     50

BSNT_01716___     51 SVRKMVEATMAGSNIITYKKDTSALSLSEKNELAKKTIVSYQKVAAAEGV    100
                     |::||.||||||||::..|:||:.::|:||:.||::|||||||||||||:
RBAM_010300__     51 SIKKMTEATMAGSNLVKGKRDTNGMTLAEKDALARQTIVSYQKVAAAEGI    100

BSNT_01716___    101 GTGAGGIFLGIADFPLLLSIKMKCLFTLSSIYGFDVKDAQERMFLLLVFQ    150
                     ||||||||||:|||||||||||||||.|.||||:||||..||:|||.:||
RBAM_010300__    101 GTGAGGIFLGMADFPLLLSIKMKCLFDLVSIYGYDVKDRDERLFLLFIFQ    150

BSNT_01716___    151 LAFSSDDGRKSLFSVIENWETEKKCIDWRVFQQEYRDYIDVVKLFQLLPG    200
                     |||||.:.||.::|:||.|:::|..:||||||||||||:||||||||||.
RBAM_010300__    151 LAFSSGEQRKRIYSMIEQWDSKKHDVDWRVFQQEYRDYLDVVKLFQLLPV    200

BSNT_01716___    201 VGAAVGGIANYKLLAQLGETARHVFHLRILKEKAGE    236
                     |||||||.||||||:||||||||||||||  ..||.
RBAM_010300__    201 VGAAVGGAANYKLLSQLGETARHVFHLRI--TAAGT    234


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