Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01716 and RBAM_010300
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:24
# Commandline: needle
# -asequence dna-align/BSNT_01716___ecsC.1.9828.seq
# -bsequence dna-align/RBAM_010300___ecsC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01716___ecsC-RBAM_010300___ecsC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01716___ecsC-RBAM_010300___ecsC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01716___ecsC
# 2: RBAM_010300___ecsC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 737
# Identity: 520/737 (70.6%)
# Similarity: 520/737 (70.6%)
# Gaps: 58/737 ( 7.9%)
# Score: 1764.0
#
#
#=======================================
BSNT_01716___ 1 ATGACAGATAATCAGCTGCTGATGCAGGAAGCTTTGGAATGGAAAATGCA 50
|||||.||..||||||.||||||.||||||||..||.||||||||..||.
RBAM_010300__ 1 ATGACCGACGATCAGCAGCTGATACAGGAAGCACTGCAATGGAAAGCGCG 50
BSNT_01716___ 51 TTTTTTGCGAAAGGATTCCATGTTTGAACGCTTTTCGAAGCGTGTCCAGA 100
|||||||||.||.|||||.|||.|||||||.|||||.||..|..|.|||.
RBAM_010300__ 51 TTTTTTGCGCAAAGATTCTATGCTTGAACGTTTTTCTAAAGGAATGCAGG 100
BSNT_01716___ 101 CGAAGGTGAATGAACGGATTCCTGAAAAAATCCATACGGTCGTCACCGAG 150
||||..|.|||||.||||||||.||.|||||.|||.|.|||.||||.||.
RBAM_010300__ 101 CGAAAATAAATGAGCGGATTCCCGATAAAATTCATGCCGTCATCACAGAA 150
BSNT_01716___ 151 AGTGTGAGAAAAATGGTAGAAGCGACAATGGCCGGCTCCAATATCATCAC 200
||..|.|.|||||||...|||||.||||||||.||.||.||| |
RBAM_010300__ 151 AGCATTAAAAAAATGACCGAAGCAACAATGGCGGGTTCAAAT-------C 193
BSNT_01716___ 201 TTATAAAA-------AGGATACAAGTGCAC----TGTCGCTCAGTGAAAA 239
|..|.||| .|||||||| || ||.||||...||||||
RBAM_010300__ 194 TGGTGAAAGGCAAGCGGGATACAA----ACGGTATGACGCTTGCTGAAAA 239
BSNT_01716___ 240 AAATGAATTGGCGAAAAAAACGATTGTTTCTTATCAGAAAGTGGCAGCTG 289
|.|||...|.||.|.|.||||.||.||.||.||.||.||.||.||.||.|
RBAM_010300__ 240 AGATGCCCTCGCCAGACAAACCATCGTATCGTACCAAAAGGTCGCGGCAG 289
BSNT_01716___ 290 CTGAGGGAGTCGGCACCGGAGCGGGCGGCATTTTTTTAGGCATTGCTGAT 339
|.||.||..||||.||.||.||.|||||.|||||||||||.||.||||||
RBAM_010300__ 290 CCGAAGGTATCGGTACGGGGGCCGGCGGAATTTTTTTAGGGATGGCTGAT 339
BSNT_01716___ 340 TTTCCGCTGCTGCTTTCAATTAAGATGAAGTGTTTATT-TACCTTGTCTT 388
|||||..|||||.|.||.|||||.|||||.|||.|.|| .|.|||||| |
RBAM_010300__ 340 TTTCCTTTGCTGTTATCCATTAAAATGAAATGTCTGTTCGATCTTGTC-T 388
BSNT_01716___ 389 CCATTTACGGCTTTGATGTGAAAGATGCACAAGAAAG---GA-TGTTTTT 434
|.||||||||||.||||||||||| |||.|.|.| || |||||||
RBAM_010300__ 389 CTATTTACGGCTATGATGTGAAAG----ACAGGGATGAGCGATTGTTTTT 434
BSNT_01716___ 435 GCTGCTCGTGTTTCAGCTTGCGTTTTCGAGTGACGATG----GCCGTAAA 480
||||.|..|.||||||.|.||.||.||.|| ||.|| ||.| ||
RBAM_010300__ 435 GCTGTTTATTTTTCAGTTGGCTTTCTCAAG---CGGTGAACAGCGG--AA 479
BSNT_01716___ 481 TCGC-TTTTTTCTGTCATCGAAAATTGGGAGACGGAGAAAAAGTGCA--- 526
.||| |.|..||..|.||.|||.|.|||||..| |||||| |||
RBAM_010300__ 480 ACGCATATACTCAATGATTGAACAGTGGGATTC---GAAAAA--GCATGA 524
BSNT_01716___ 527 --TCGACTGGAGAGTGTTCCAGCAGGAATATCGCGATTATATCGACGTAG 574
||||.||||||||.||.|||||||||||.|||||||||.|.|||||.|
RBAM_010300__ 525 TGTCGATTGGAGAGTTTTTCAGCAGGAATACCGCGATTATCTGGACGTGG 574
BSNT_01716___ 575 TGAAGCTTTTTCAGCTTTTGCCGGGCGTGGGAGCGGCAGTCGGCGGAATT 624
||||..|.||||||||||||||||.|||.|||||.||.||.||||||...
RBAM_010300__ 575 TGAAATTGTTTCAGCTTTTGCCGGTCGTCGGAGCCGCCGTGGGCGGAGCG 624
BSNT_01716___ 625 GCCAATTATAAGCTGCTTGCTCAGCTTGGAGAAACGGCAAGACATGTTTT 674
|||||||||||.|||||..|.|||||.||.||.||||||||.||.|||||
RBAM_010300__ 625 GCCAATTATAAACTGCTGTCACAGCTCGGTGAGACGGCAAGGCACGTTTT 674
BSNT_01716___ 675 TCATCTGAGGATATTAAAGGAAAAAGCCGGAGAATAA 711
||||.|.|| .||.|.|| .||||||....|||
RBAM_010300__ 675 TCATTTAAG--AATCACAG----CAGCCGGTACGTAA 705
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