Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01713 and RBAM_010280

See DNA alignment / Visit BSNT_01713 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:24
# Commandline: needle
#    -asequence pep-align/BSNT_01713___ecsA.1.9828.seq
#    -bsequence pep-align/RBAM_010280___ecsA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01713___ecsA-RBAM_010280___ecsA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01713___ecsA-RBAM_010280___ecsA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01713___ecsA
# 2: RBAM_010280___ecsA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 247
# Identity:     233/247 (94.3%)
# Similarity:   240/247 (97.2%)
# Gaps:           0/247 ( 0.0%)
# Score: 1206.0
# 
#
#=======================================

BSNT_01713___      1 MSLLSVKDLTGGYTRNPVLKNVSFTLEPNQIVGLIGLNGAGKSTTIRHII     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_010280__      1 MSLLSVKDLTGGYTRNPVLKNVSFTLEPNQIVGLIGLNGAGKSTTIRHII     50

BSNT_01713___     51 GLMDPHKGSIELNGKTFAEDPEGYRSQFTYIPETPVLYEELTLMEHLELT    100
                     |||||||||||||||||:||.|.||||||||||||||||||||.||||||
RBAM_010280__     51 GLMDPHKGSIELNGKTFSEDKESYRSQFTYIPETPVLYEELTLKEHLELT    100

BSNT_01713___    101 AMAYGLSKETMEKRLPPLLKEFRMEKRLKWFPAHFSKGMKQKVMIMCAFL    150
                     ||||||||||:|||||||||||||||||||||||||||||||||||||||
RBAM_010280__    101 AMAYGLSKETLEKRLPPLLKEFRMEKRLKWFPAHFSKGMKQKVMIMCAFL    150

BSNT_01713___    151 AEPALYIIDEPFLGLDPLAINALLERMNEAKKGGASVLMSTHILATAERY    200
                     |||:|||||||||||||||||||||||:.|||.|:|||||||||||||||
RBAM_010280__    151 AEPSLYIIDEPFLGLDPLAINALLERMDAAKKAGSSVLMSTHILATAERY    200

BSNT_01713___    201 CDSFIILHNGEVRARGTLSELREQFGMKDAALDDLYLELTKEDAGHE    247
                     ||:|||||||||||.|||.|||||||||||||||||:||||||||||
RBAM_010280__    201 CDAFIILHNGEVRASGTLEELREQFGMKDAALDDLYIELTKEDAGHE    247


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