Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01713 and RBAM_010280
See
Amino acid alignment /
Visit
BSNT_01713 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:24
# Commandline: needle
# -asequence dna-align/BSNT_01713___ecsA.1.9828.seq
# -bsequence dna-align/RBAM_010280___ecsA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01713___ecsA-RBAM_010280___ecsA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01713___ecsA-RBAM_010280___ecsA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01713___ecsA
# 2: RBAM_010280___ecsA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 744
# Identity: 597/744 (80.2%)
# Similarity: 597/744 (80.2%)
# Gaps: 0/744 ( 0.0%)
# Score: 2397.0
#
#
#=======================================
BSNT_01713___ 1 ATGTCTCTGCTATCGGTAAAAGACTTGACCGGCGGATATACAAGGAATCC 50
||||||||||||||||||||||||||.||||||||.|||||.||.||.||
RBAM_010280__ 1 ATGTCTCTGCTATCGGTAAAAGACTTAACCGGCGGTTATACGAGAAACCC 50
BSNT_01713___ 51 GGTTTTAAAAAACGTATCATTCACCCTTGAACCGAATCAAATTGTCGGAT 100
|||.||||||||.||.||||||||||||||.|||||.||.|||||||||.
RBAM_010280__ 51 GGTCTTAAAAAATGTTTCATTCACCCTTGAGCCGAACCAGATTGTCGGAC 100
BSNT_01713___ 101 TAATCGGGCTGAATGGTGCTGGTAAAAGTACAACAATCAGACACATCATC 150
|.|||||..|.||.||.||.||.|||||.||.||.|||.|.||.||.|||
RBAM_010280__ 101 TCATCGGATTAAACGGCGCGGGCAAAAGCACGACGATCCGGCATATTATC 150
BSNT_01713___ 151 GGGCTGATGGACCCGCATAAAGGTTCAATCGAATTAAACGGTAAAACGTT 200
||..|.|||||||||||||||||.||.|||||..|.|||||.||.|||||
RBAM_010280__ 151 GGATTAATGGACCCGCATAAAGGCTCGATCGAGCTGAACGGCAAGACGTT 200
BSNT_01713___ 201 TGCTGAGGATCCGGAAGGCTACCGTTCACAATTTACCTATATACCTGAAA 250
|.|.||||||..||||.|.|||||.||.||||||||.||.||.||.||||
RBAM_010280__ 201 TTCGGAGGATAAGGAAAGTTACCGCTCGCAATTTACGTACATCCCCGAAA 250
BSNT_01713___ 251 CACCTGTTTTATACGAAGAATTGACGCTGATGGAGCATCTTGAACTAACA 300
|.||.||..|.||.||||||.|||||||.|..||||||||.||.||.||.
RBAM_010280__ 251 CGCCGGTGCTGTATGAAGAACTGACGCTCAAAGAGCATCTGGAGCTGACG 300
BSNT_01713___ 301 GCCATGGCATATGGACTGTCAAAAGAAACGATGGAGAAAAGGCTGCCTCC 350
||||||||.||.||.||.||.|||||||||.|.||.||||||||.|||||
RBAM_010280__ 301 GCCATGGCGTACGGCCTTTCCAAAGAAACGCTTGAAAAAAGGCTTCCTCC 350
BSNT_01713___ 351 GCTACTAAAGGAATTCCGAATGGAAAAGAGGCTGAAGTGGTTCCCGGCCC 400
|||.||.||.||||||.||||||||||.||||||||.|||||.||.||.|
RBAM_010280__ 351 GCTTCTGAAAGAATTCAGAATGGAAAAAAGGCTGAAATGGTTTCCCGCTC 400
BSNT_01713___ 401 ATTTTTCTAAAGGAATGAAGCAGAAGGTTATGATTATGTGCGCATTTTTG 450
|.|||||.|||||.|||||||||||.||.|||||.||||||||.|||.|.
RBAM_010280__ 401 ACTTTTCCAAAGGGATGAAGCAGAAAGTCATGATCATGTGCGCGTTTCTC 450
BSNT_01713___ 451 GCAGAGCCTGCGCTCTACATTATTGATGAGCCTTTTCTAGGGCTTGATCC 500
||.||||||.||||.||.||.|||||.|||||.|||||.||.|||||.||
RBAM_010280__ 451 GCGGAGCCTTCGCTTTATATCATTGACGAGCCGTTTCTCGGCCTTGACCC 500
BSNT_01713___ 501 GCTTGCCATTAACGCGCTGCTTGAACGGATGAATGAAGCGAAAAAAGGCG 550
||||||.||.||.||..||||.||.||||||.|.|..||||||||||.||
RBAM_010280__ 501 GCTTGCGATCAATGCATTGCTGGAGCGGATGGACGCCGCGAAAAAAGCCG 550
BSNT_01713___ 551 GGGCGAGCGTGCTGATGTCAACACACATTTTGGCAACGGCAGAACGCTAT 600
|..|.|||||||||||||||||.||.||.|||||.||||||||.|||||.
RBAM_010280__ 551 GATCAAGCGTGCTGATGTCAACGCATATCTTGGCTACGGCAGAGCGCTAC 600
BSNT_01713___ 601 TGTGATTCGTTTATTATTTTACATAACGGCGAGGTGCGGGCGCGCGGCAC 650
|||||..|.||.||||||||||||||||||||.||||||||..|||||||
RBAM_010280__ 601 TGTGACGCTTTCATTATTTTACATAACGGCGAAGTGCGGGCAAGCGGCAC 650
BSNT_01713___ 651 GCTGTCAGAGCTCAGAGAGCAGTTTGGAATGAAGGACGCGGCGCTGGACG 700
.|||..|||.||.|||||||||||.||.|||||.|||||.||.||.||.|
RBAM_010280__ 651 ACTGGAAGAACTGAGAGAGCAGTTCGGCATGAAAGACGCAGCTCTTGATG 700
BSNT_01713___ 701 ATTTGTATCTTGAGCTTACAAAGGAAGACGCTGGCCATGAATAA 744
|.||||||.|.||.||.||.|||||||||||.||||||||||||
RBAM_010280__ 701 ACTTGTATATCGAACTGACGAAGGAAGACGCCGGCCATGAATAA 744
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.