Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01706 and RBAM_010240

See DNA alignment / Visit BSNT_01706 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:23
# Commandline: needle
#    -asequence pep-align/BSNT_01706.1.9828.seq
#    -bsequence pep-align/RBAM_010240___yhaH.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01706-RBAM_010240___yhaH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01706-RBAM_010240___yhaH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01706
# 2: RBAM_010240___yhaH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 133
# Identity:      99/133 (74.4%)
# Similarity:   110/133 (82.7%)
# Gaps:          15/133 (11.3%)
# Score: 503.0
# 
#
#=======================================

BSNT_01706         1 MLNESYFEEKDGVIVMASGRSLLTGLFVGGIIGGAAVLLTAPSSGKQLRE     50
                                    ||.||||||||||||:||||||||:||||||:||.
RBAM_010240__      1 ---------------MADGRSLLTGLFVGGLIGGAAVLLSAPSSGKELRG     35

BSNT_01706        51 KMKTNYDSFEETIKRLKSDGLALKDQLIKAAKESTDVIKDVGGELQTSIK    100
                     |:|.|.:|.|:||||||.||:||||||::.||||.:||||||||||||||
RBAM_010240__     36 KIKANCNSIEDTIKRLKKDGMALKDQLVQTAKESAEVIKDVGGELQTSIK     85

BSNT_01706       101 KWQEEIKPHQQDLQKEIADIEEKIRQLEKTLQN    133
                     :||||||||||||||||||||||||||||||||
RBAM_010240__     86 RWQEEIKPHQQDLQKEIADIEEKIRQLEKTLQN    118


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